Gene : Phvul.006G163600 P. vulgaris v2.1
Defline:  (1 of 3) K02955 - small subunit ribosomal protein S14e (RP-S14e, RPS14) Genomic Order:  1633
Name:  ? Phvul.006G163600 Secondary Identifier:  ? PAC:37173367
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G163600 0.5kb upstream 0.5kb upstream 2450 true Chr06: 26659536-26661985 Phaseolus vulgaris
Phvul.006G163600 0.5kb upstream 0.5kb upstream 500 false Chr06: 26661486-26661985 Phaseolus vulgaris
Phvul.006G163600 0.5kb downstream 0.5kb downstream 2450 true Chr06: 26659036-26661485 Phaseolus vulgaris
Phvul.006G163600 0.5kb downstream 0.5kb downstream 500 false Chr06: 26659036-26659535 Phaseolus vulgaris
Phvul.006G163600 1.0kb upstream 1.0kb upstream 2950 true Chr06: 26659536-26662485 Phaseolus vulgaris
Phvul.006G163600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26661486-26662485 Phaseolus vulgaris
Phvul.006G163600 1.0kb downstream 1.0kb downstream 2950 true Chr06: 26658536-26661485 Phaseolus vulgaris
Phvul.006G163600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26658536-26659535 Phaseolus vulgaris
Phvul.006G163600 2.0kb upstream 2.0kb upstream 3950 true Chr06: 26659536-26663485 Phaseolus vulgaris
Phvul.006G163600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26661486-26663485 Phaseolus vulgaris
Phvul.006G163600 2.0kb downstream 2.0kb downstream 3950 true Chr06: 26657536-26661485 Phaseolus vulgaris
Phvul.006G163600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26657536-26659535 Phaseolus vulgaris
Phvul.006G163600 5.0kb upstream 5.0kb upstream 6950 true Chr06: 26659536-26666485 Phaseolus vulgaris
Phvul.006G163600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26661486-26666485 Phaseolus vulgaris
Phvul.006G163600 5.0kb downstream 5.0kb downstream 6950 true Chr06: 26654536-26661485 Phaseolus vulgaris
Phvul.006G163600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26654536-26659535 Phaseolus vulgaris
Phvul.006G163600 10.0kb upstream 10.0kb upstream 11950 true Chr06: 26659536-26671485 Phaseolus vulgaris
Phvul.006G163600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26661486-26671485 Phaseolus vulgaris
Phvul.006G163600 10.0kb downstream 10.0kb downstream 11950 true Chr06: 26649536-26661485 Phaseolus vulgaris
Phvul.006G163600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26649536-26659535 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314462 5265 Fabidae View MSA
124067342 5270 Rosid View MSA
123748294 5271 Pentapetalae View MSA
122796164 5272 Eudicot View MSA
122046051 5273 Angiosperm View MSA
121350914 5274 Embryophyte View MSA
123426853 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.9295 0.0 111.159 High  
cufflinks 62.2918 0.0 161.271 High High
cufflinks 27.1238 0.0 71.4329   Low
cufflinks 67.6281 0.0 175.216 High High
cufflinks 44.6824 0.0 115.677 High  
cufflinks 24.4321 0.0 64.7753   Low
cufflinks 31.8633 0.0 83.1114 High  
cufflinks 44.2341 0.0 114.418 High  
cufflinks 44.7213 0.0 115.659 High  
cufflinks 31.536 0.0 82.5772    
cufflinks 39.1738 0.0 101.632 High  

0 Strain