Gene : Phvul.006G164300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  1640
Name:  ? Phvul.006G164300 Secondary Identifier:  ? PAC:37173581
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G164300 0.5kb upstream 0.5kb upstream 4183 true Chr06: 26738966-26743148 Phaseolus vulgaris
Phvul.006G164300 0.5kb upstream 0.5kb upstream 500 false Chr06: 26738966-26739465 Phaseolus vulgaris
Phvul.006G164300 0.5kb downstream 0.5kb downstream 4183 true Chr06: 26739466-26743648 Phaseolus vulgaris
Phvul.006G164300 0.5kb downstream 0.5kb downstream 500 false Chr06: 26743149-26743648 Phaseolus vulgaris
Phvul.006G164300 1.0kb upstream 1.0kb upstream 4683 true Chr06: 26738466-26743148 Phaseolus vulgaris
Phvul.006G164300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26738466-26739465 Phaseolus vulgaris
Phvul.006G164300 1.0kb downstream 1.0kb downstream 4683 true Chr06: 26739466-26744148 Phaseolus vulgaris
Phvul.006G164300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26743149-26744148 Phaseolus vulgaris
Phvul.006G164300 2.0kb upstream 2.0kb upstream 5683 true Chr06: 26737466-26743148 Phaseolus vulgaris
Phvul.006G164300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26737466-26739465 Phaseolus vulgaris
Phvul.006G164300 2.0kb downstream 2.0kb downstream 5683 true Chr06: 26739466-26745148 Phaseolus vulgaris
Phvul.006G164300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26743149-26745148 Phaseolus vulgaris
Phvul.006G164300 5.0kb upstream 5.0kb upstream 8683 true Chr06: 26734466-26743148 Phaseolus vulgaris
Phvul.006G164300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26734466-26739465 Phaseolus vulgaris
Phvul.006G164300 5.0kb downstream 5.0kb downstream 8683 true Chr06: 26739466-26748148 Phaseolus vulgaris
Phvul.006G164300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26743149-26748148 Phaseolus vulgaris
Phvul.006G164300 10.0kb upstream 10.0kb upstream 13683 true Chr06: 26729466-26743148 Phaseolus vulgaris
Phvul.006G164300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26729466-26739465 Phaseolus vulgaris
Phvul.006G164300 10.0kb downstream 10.0kb downstream 13683 true Chr06: 26739466-26753148 Phaseolus vulgaris
Phvul.006G164300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26743149-26753148 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309593 5265 Fabidae View MSA
124069116 5270 Rosid View MSA
123736390 5271 Pentapetalae View MSA
122788335 5272 Eudicot View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.273754 0.0 1.04572 Low  
cufflinks 1.24678 0.0 4.11593    
cufflinks 7.54026 0.0 20.475   High
cufflinks 2.1535 0.0 6.71881    
cufflinks 1.08737 0.0 3.67255    
cufflinks 5.83643 0.0 16.2612   High
cufflinks 0.0901261 0.0 0.376234 Low Low
cufflinks 0.268109 0.0 1.02242 Low  
cufflinks 0.0588689 0.0 0.255664 Low Low
cufflinks 2.34617 0.0 7.21499    
cufflinks 1.72063 0.0 5.50912    

0 Strain