Gene : Phvul.009G056300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13286 - SAP30 Genomic Order:  569
Name:  ? Phvul.009G056300 Secondary Identifier:  ? PAC:37150257
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G056300 0.5kb upstream 0.5kb upstream 4149 true Chr09: 10649949-10654097 Phaseolus vulgaris
Phvul.009G056300 0.5kb upstream 0.5kb upstream 500 false Chr09: 10653598-10654097 Phaseolus vulgaris
Phvul.009G056300 0.5kb downstream 0.5kb downstream 4149 true Chr09: 10649449-10653597 Phaseolus vulgaris
Phvul.009G056300 0.5kb downstream 0.5kb downstream 500 false Chr09: 10649449-10649948 Phaseolus vulgaris
Phvul.009G056300 1.0kb upstream 1.0kb upstream 4649 true Chr09: 10649949-10654597 Phaseolus vulgaris
Phvul.009G056300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10653598-10654597 Phaseolus vulgaris
Phvul.009G056300 1.0kb downstream 1.0kb downstream 4649 true Chr09: 10648949-10653597 Phaseolus vulgaris
Phvul.009G056300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10648949-10649948 Phaseolus vulgaris
Phvul.009G056300 2.0kb upstream 2.0kb upstream 5649 true Chr09: 10649949-10655597 Phaseolus vulgaris
Phvul.009G056300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10653598-10655597 Phaseolus vulgaris
Phvul.009G056300 2.0kb downstream 2.0kb downstream 5649 true Chr09: 10647949-10653597 Phaseolus vulgaris
Phvul.009G056300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10647949-10649948 Phaseolus vulgaris
Phvul.009G056300 5.0kb upstream 5.0kb upstream 8649 true Chr09: 10649949-10658597 Phaseolus vulgaris
Phvul.009G056300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10653598-10658597 Phaseolus vulgaris
Phvul.009G056300 5.0kb downstream 5.0kb downstream 8649 true Chr09: 10644949-10653597 Phaseolus vulgaris
Phvul.009G056300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10644949-10649948 Phaseolus vulgaris
Phvul.009G056300 10.0kb upstream 10.0kb upstream 13649 true Chr09: 10649949-10663597 Phaseolus vulgaris
Phvul.009G056300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10653598-10663597 Phaseolus vulgaris
Phvul.009G056300 10.0kb downstream 10.0kb downstream 13649 true Chr09: 10639949-10653597 Phaseolus vulgaris
Phvul.009G056300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10639949-10649948 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300805 5265 Fabidae View MSA
124061386 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8722 0.0 45.0905    
cufflinks 40.659 0.0 129.591 High High
cufflinks 22.5967 0.0 73.1781    
cufflinks 13.327 0.0 46.7264    
cufflinks 21.0232 0.0 68.6442    
cufflinks 33.8865 0.0 107.701 High High
cufflinks 13.4566 0.0 46.5579    
cufflinks 14.443 0.0 49.2997    
cufflinks 9.4851 0.0 35.1475   Low
cufflinks 12.6389 0.0 44.4275    
cufflinks 28.167 0.0 89.8847    

0 Strain