Gene : Phvul.009G070300 P. vulgaris v2.1
Defline:  (1 of 5) PF09177 - Syntaxin 6, N-terminal (Syntaxin-6_N) Genomic Order:  723
Name:  ? Phvul.009G070300 Secondary Identifier:  ? PAC:37151907
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G070300 0.5kb upstream 0.5kb upstream 8019 true Chr09: 12194585-12202603 Phaseolus vulgaris
Phvul.009G070300 0.5kb upstream 0.5kb upstream 500 false Chr09: 12202104-12202603 Phaseolus vulgaris
Phvul.009G070300 0.5kb downstream 0.5kb downstream 8019 true Chr09: 12194085-12202103 Phaseolus vulgaris
Phvul.009G070300 0.5kb downstream 0.5kb downstream 500 false Chr09: 12194085-12194584 Phaseolus vulgaris
Phvul.009G070300 1.0kb upstream 1.0kb upstream 8519 true Chr09: 12194585-12203103 Phaseolus vulgaris
Phvul.009G070300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12202104-12203103 Phaseolus vulgaris
Phvul.009G070300 1.0kb downstream 1.0kb downstream 8519 true Chr09: 12193585-12202103 Phaseolus vulgaris
Phvul.009G070300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12193585-12194584 Phaseolus vulgaris
Phvul.009G070300 2.0kb upstream 2.0kb upstream 9519 true Chr09: 12194585-12204103 Phaseolus vulgaris
Phvul.009G070300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12202104-12204103 Phaseolus vulgaris
Phvul.009G070300 2.0kb downstream 2.0kb downstream 9519 true Chr09: 12192585-12202103 Phaseolus vulgaris
Phvul.009G070300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12192585-12194584 Phaseolus vulgaris
Phvul.009G070300 5.0kb upstream 5.0kb upstream 12519 true Chr09: 12194585-12207103 Phaseolus vulgaris
Phvul.009G070300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12202104-12207103 Phaseolus vulgaris
Phvul.009G070300 5.0kb downstream 5.0kb downstream 12519 true Chr09: 12189585-12202103 Phaseolus vulgaris
Phvul.009G070300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12189585-12194584 Phaseolus vulgaris
Phvul.009G070300 10.0kb upstream 10.0kb upstream 17519 true Chr09: 12194585-12212103 Phaseolus vulgaris
Phvul.009G070300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12202104-12212103 Phaseolus vulgaris
Phvul.009G070300 10.0kb downstream 10.0kb downstream 17519 true Chr09: 12184585-12202103 Phaseolus vulgaris
Phvul.009G070300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12184585-12194584 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309285 5265 Fabidae View MSA
124064346 5270 Rosid View MSA
123743910 5271 Pentapetalae View MSA
122788324 5272 Eudicot View MSA
122042907 5273 Angiosperm View MSA
121348883 5274 Embryophyte View MSA
123381058 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.76506 0.0 32.2779    
cufflinks 3.34741 0.0 20.4859    
cufflinks 3.77445 0.0 19.8075    
cufflinks 19.1497 0.0 75.9512   High
cufflinks 3.37677 0.0 20.6337    
cufflinks 2.47376 0.0 14.4919    
cufflinks 2.5649 0.0 13.0574    
cufflinks 2.35825 0.0 10.1817    
cufflinks 2.6207 0.0 11.2508    
cufflinks 2.52029 0.0 17.3139    
cufflinks 2.48219 0.0 14.9537    

0 Strain