Gene : Phvul.009G039500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15555 - ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED Genomic Order:  395
Name:  ? Phvul.009G039500 Secondary Identifier:  ? PAC:37149105
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G039500 0.5kb upstream 0.5kb upstream 6023 true Chr09: 8304179-8310201 Phaseolus vulgaris
Phvul.009G039500 0.5kb upstream 0.5kb upstream 500 false Chr09: 8309702-8310201 Phaseolus vulgaris
Phvul.009G039500 0.5kb downstream 0.5kb downstream 6023 true Chr09: 8303679-8309701 Phaseolus vulgaris
Phvul.009G039500 0.5kb downstream 0.5kb downstream 500 false Chr09: 8303679-8304178 Phaseolus vulgaris
Phvul.009G039500 1.0kb upstream 1.0kb upstream 6523 true Chr09: 8304179-8310701 Phaseolus vulgaris
Phvul.009G039500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8309702-8310701 Phaseolus vulgaris
Phvul.009G039500 1.0kb downstream 1.0kb downstream 6523 true Chr09: 8303179-8309701 Phaseolus vulgaris
Phvul.009G039500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8303179-8304178 Phaseolus vulgaris
Phvul.009G039500 2.0kb upstream 2.0kb upstream 7523 true Chr09: 8304179-8311701 Phaseolus vulgaris
Phvul.009G039500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8309702-8311701 Phaseolus vulgaris
Phvul.009G039500 2.0kb downstream 2.0kb downstream 7523 true Chr09: 8302179-8309701 Phaseolus vulgaris
Phvul.009G039500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8302179-8304178 Phaseolus vulgaris
Phvul.009G039500 5.0kb upstream 5.0kb upstream 10523 true Chr09: 8304179-8314701 Phaseolus vulgaris
Phvul.009G039500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8309702-8314701 Phaseolus vulgaris
Phvul.009G039500 5.0kb downstream 5.0kb downstream 10523 true Chr09: 8299179-8309701 Phaseolus vulgaris
Phvul.009G039500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8299179-8304178 Phaseolus vulgaris
Phvul.009G039500 10.0kb upstream 10.0kb upstream 15523 true Chr09: 8304179-8319701 Phaseolus vulgaris
Phvul.009G039500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8309702-8319701 Phaseolus vulgaris
Phvul.009G039500 10.0kb downstream 10.0kb downstream 15523 true Chr09: 8294179-8309701 Phaseolus vulgaris
Phvul.009G039500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8294179-8304178 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306801 5265 Fabidae View MSA
124061111 5270 Rosid View MSA
123740559 5271 Pentapetalae View MSA
122788257 5272 Eudicot View MSA
122044009 5273 Angiosperm View MSA
121344053 5274 Embryophyte View MSA
123425257 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.79804 0.0 18.9637   High
cufflinks 5.21772 0.0 14.9447   High
cufflinks 2.52971 0.0 7.84143    
cufflinks 4.87112 0.0 14.121    
cufflinks 3.31745 0.0 10.0581    
cufflinks 2.17793 0.0 6.87948   Low
cufflinks 2.55869 0.0 7.90145    
cufflinks 3.03229 0.0 9.1635    
cufflinks 3.38513 0.0 10.1503    
cufflinks 4.52033 0.0 13.1618    
cufflinks 2.80512 0.0 8.65042    

0 Strain