Gene : Phvul.009G039600 P. vulgaris v2.1
Defline:  (1 of 4) K02940 - large subunit ribosomal protein L9e (RP-L9e, RPL9) Genomic Order:  396
Name:  ? Phvul.009G039600 Secondary Identifier:  ? PAC:37151387
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G039600 0.5kb upstream 0.5kb upstream 1627 true Chr09: 8311591-8313217 Phaseolus vulgaris
Phvul.009G039600 0.5kb upstream 0.5kb upstream 500 false Chr09: 8312718-8313217 Phaseolus vulgaris
Phvul.009G039600 0.5kb downstream 0.5kb downstream 1627 true Chr09: 8311091-8312717 Phaseolus vulgaris
Phvul.009G039600 0.5kb downstream 0.5kb downstream 500 false Chr09: 8311091-8311590 Phaseolus vulgaris
Phvul.009G039600 1.0kb upstream 1.0kb upstream 2127 true Chr09: 8311591-8313717 Phaseolus vulgaris
Phvul.009G039600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8312718-8313717 Phaseolus vulgaris
Phvul.009G039600 1.0kb downstream 1.0kb downstream 2127 true Chr09: 8310591-8312717 Phaseolus vulgaris
Phvul.009G039600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8310591-8311590 Phaseolus vulgaris
Phvul.009G039600 2.0kb upstream 2.0kb upstream 3127 true Chr09: 8311591-8314717 Phaseolus vulgaris
Phvul.009G039600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8312718-8314717 Phaseolus vulgaris
Phvul.009G039600 2.0kb downstream 2.0kb downstream 3127 true Chr09: 8309591-8312717 Phaseolus vulgaris
Phvul.009G039600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8309591-8311590 Phaseolus vulgaris
Phvul.009G039600 5.0kb upstream 5.0kb upstream 6127 true Chr09: 8311591-8317717 Phaseolus vulgaris
Phvul.009G039600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8312718-8317717 Phaseolus vulgaris
Phvul.009G039600 5.0kb downstream 5.0kb downstream 6127 true Chr09: 8306591-8312717 Phaseolus vulgaris
Phvul.009G039600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8306591-8311590 Phaseolus vulgaris
Phvul.009G039600 10.0kb upstream 10.0kb upstream 11127 true Chr09: 8311591-8322717 Phaseolus vulgaris
Phvul.009G039600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8312718-8322717 Phaseolus vulgaris
Phvul.009G039600 10.0kb downstream 10.0kb downstream 11127 true Chr09: 8301591-8312717 Phaseolus vulgaris
Phvul.009G039600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8301591-8311590 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311013 5265 Fabidae View MSA
124074174 5270 Rosid View MSA
123746970 5271 Pentapetalae View MSA
122791041 5272 Eudicot View MSA
122049178 5273 Angiosperm View MSA
121350412 5274 Embryophyte View MSA
123424125 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.3087 0.0 47.3627    
cufflinks 23.9745 0.0 63.9558   High
cufflinks 7.02427 0.0 21.1234   Low
cufflinks 28.0452 0.0 73.9365   High
cufflinks 12.452 0.0 35.2951    
cufflinks 7.7448 0.0 22.9911   Low
cufflinks 9.32829 0.0 26.9838    
cufflinks 16.3534 0.0 44.9549    
cufflinks 10.6443 0.0 30.3285    
cufflinks 12.5459 0.0 35.4535    
cufflinks 17.3725 0.0 47.559    

0 Strain