Gene : Phvul.009G039200 P. vulgaris v2.1
Defline:  (1 of 74) PF00892 - EamA-like transporter family (EamA) Genomic Order:  392
Name:  ? Phvul.009G039200 Secondary Identifier:  ? PAC:37150535
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G039200 0.5kb upstream 0.5kb upstream 10890 true Chr09: 8280297-8291186 Phaseolus vulgaris
Phvul.009G039200 0.5kb upstream 0.5kb upstream 500 false Chr09: 8290687-8291186 Phaseolus vulgaris
Phvul.009G039200 0.5kb downstream 0.5kb downstream 10890 true Chr09: 8279797-8290686 Phaseolus vulgaris
Phvul.009G039200 0.5kb downstream 0.5kb downstream 500 false Chr09: 8279797-8280296 Phaseolus vulgaris
Phvul.009G039200 1.0kb upstream 1.0kb upstream 11390 true Chr09: 8280297-8291686 Phaseolus vulgaris
Phvul.009G039200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8290687-8291686 Phaseolus vulgaris
Phvul.009G039200 1.0kb downstream 1.0kb downstream 11390 true Chr09: 8279297-8290686 Phaseolus vulgaris
Phvul.009G039200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8279297-8280296 Phaseolus vulgaris
Phvul.009G039200 2.0kb upstream 2.0kb upstream 12390 true Chr09: 8280297-8292686 Phaseolus vulgaris
Phvul.009G039200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8290687-8292686 Phaseolus vulgaris
Phvul.009G039200 2.0kb downstream 2.0kb downstream 12390 true Chr09: 8278297-8290686 Phaseolus vulgaris
Phvul.009G039200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8278297-8280296 Phaseolus vulgaris
Phvul.009G039200 5.0kb upstream 5.0kb upstream 15390 true Chr09: 8280297-8295686 Phaseolus vulgaris
Phvul.009G039200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8290687-8295686 Phaseolus vulgaris
Phvul.009G039200 5.0kb downstream 5.0kb downstream 15390 true Chr09: 8275297-8290686 Phaseolus vulgaris
Phvul.009G039200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8275297-8280296 Phaseolus vulgaris
Phvul.009G039200 10.0kb upstream 10.0kb upstream 20390 true Chr09: 8280297-8300686 Phaseolus vulgaris
Phvul.009G039200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8290687-8300686 Phaseolus vulgaris
Phvul.009G039200 10.0kb downstream 10.0kb downstream 20390 true Chr09: 8270297-8290686 Phaseolus vulgaris
Phvul.009G039200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8270297-8280296 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026670 5273 Angiosperm View MSA
122308684 5265 Fabidae View MSA
124050671 5270 Rosid View MSA
123742527 5271 Pentapetalae View MSA
122770306 5272 Eudicot View MSA
121296466 5274 Embryophyte View MSA
123334621 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.39202 0.0 4.73377    
cufflinks 1.40865 0.0 4.79241    
cufflinks 0.0407373 0.0 0.190272 Low Low
cufflinks 0.327838 0.0 1.28042 Low  
cufflinks 0.943216 0.0 3.3759    
cufflinks 0.152998 0.0 0.631028 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.44717 0.0 7.83541   High
cufflinks 1.50163 0.0 5.11176    

0 Strain