Gene : Phvul.009G042700 P. vulgaris v2.1
Defline:  (1 of 2) K15025 - probable RNA-binding protein EIF1AD (EIF1AD) Genomic Order:  427
Name:  ? Phvul.009G042700 Secondary Identifier:  ? PAC:37150200
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G042700 0.5kb upstream 0.5kb upstream 3676 true Chr09: 8638151-8641826 Phaseolus vulgaris
Phvul.009G042700 0.5kb upstream 0.5kb upstream 500 false Chr09: 8641327-8641826 Phaseolus vulgaris
Phvul.009G042700 0.5kb downstream 0.5kb downstream 3676 true Chr09: 8637651-8641326 Phaseolus vulgaris
Phvul.009G042700 0.5kb downstream 0.5kb downstream 500 false Chr09: 8637651-8638150 Phaseolus vulgaris
Phvul.009G042700 1.0kb upstream 1.0kb upstream 4176 true Chr09: 8638151-8642326 Phaseolus vulgaris
Phvul.009G042700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8641327-8642326 Phaseolus vulgaris
Phvul.009G042700 1.0kb downstream 1.0kb downstream 4176 true Chr09: 8637151-8641326 Phaseolus vulgaris
Phvul.009G042700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8637151-8638150 Phaseolus vulgaris
Phvul.009G042700 2.0kb upstream 2.0kb upstream 5176 true Chr09: 8638151-8643326 Phaseolus vulgaris
Phvul.009G042700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8641327-8643326 Phaseolus vulgaris
Phvul.009G042700 2.0kb downstream 2.0kb downstream 5176 true Chr09: 8636151-8641326 Phaseolus vulgaris
Phvul.009G042700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8636151-8638150 Phaseolus vulgaris
Phvul.009G042700 5.0kb upstream 5.0kb upstream 8176 true Chr09: 8638151-8646326 Phaseolus vulgaris
Phvul.009G042700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8641327-8646326 Phaseolus vulgaris
Phvul.009G042700 5.0kb downstream 5.0kb downstream 8176 true Chr09: 8633151-8641326 Phaseolus vulgaris
Phvul.009G042700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8633151-8638150 Phaseolus vulgaris
Phvul.009G042700 10.0kb upstream 10.0kb upstream 13176 true Chr09: 8638151-8651326 Phaseolus vulgaris
Phvul.009G042700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8641327-8651326 Phaseolus vulgaris
Phvul.009G042700 10.0kb downstream 10.0kb downstream 13176 true Chr09: 8628151-8641326 Phaseolus vulgaris
Phvul.009G042700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8628151-8638150 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300839 5265 Fabidae View MSA
124074389 5270 Rosid View MSA
123739178 5271 Pentapetalae View MSA
122790312 5272 Eudicot View MSA
122047089 5273 Angiosperm View MSA
121344267 5274 Embryophyte View MSA
123425448 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.28348 0.0 18.5921   High
cufflinks 5.16367 0.0 15.611    
cufflinks 6.33747 0.0 18.712   High
cufflinks 5.3865 0.0 16.232    
cufflinks 6.4284 0.0 19.1234   High
cufflinks 5.82435 0.0 17.3451    
cufflinks 4.36843 0.0 13.3783   Low
cufflinks 5.17909 0.0 15.6018    
cufflinks 4.44712 0.0 13.5782   Low
cufflinks 4.47841 0.0 13.8321   Low
cufflinks 5.55093 0.0 16.6595    

0 Strain