Gene : Phvul.009G045500 P. vulgaris v2.1
Genomic Order:  456 Name:  ? Phvul.009G045500
Secondary Identifier:  ? PAC:37151030
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G045500 0.5kb upstream 0.5kb upstream 1200 true Chr09: 9011069-9012268 Phaseolus vulgaris
Phvul.009G045500 0.5kb upstream 0.5kb upstream 500 false Chr09: 9011769-9012268 Phaseolus vulgaris
Phvul.009G045500 0.5kb downstream 0.5kb downstream 1200 true Chr09: 9010569-9011768 Phaseolus vulgaris
Phvul.009G045500 0.5kb downstream 0.5kb downstream 500 false Chr09: 9010569-9011068 Phaseolus vulgaris
Phvul.009G045500 1.0kb upstream 1.0kb upstream 1700 true Chr09: 9011069-9012768 Phaseolus vulgaris
Phvul.009G045500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9011769-9012768 Phaseolus vulgaris
Phvul.009G045500 1.0kb downstream 1.0kb downstream 1700 true Chr09: 9010069-9011768 Phaseolus vulgaris
Phvul.009G045500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9010069-9011068 Phaseolus vulgaris
Phvul.009G045500 2.0kb upstream 2.0kb upstream 2700 true Chr09: 9011069-9013768 Phaseolus vulgaris
Phvul.009G045500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9011769-9013768 Phaseolus vulgaris
Phvul.009G045500 2.0kb downstream 2.0kb downstream 2700 true Chr09: 9009069-9011768 Phaseolus vulgaris
Phvul.009G045500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9009069-9011068 Phaseolus vulgaris
Phvul.009G045500 5.0kb upstream 5.0kb upstream 5700 true Chr09: 9011069-9016768 Phaseolus vulgaris
Phvul.009G045500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9011769-9016768 Phaseolus vulgaris
Phvul.009G045500 5.0kb downstream 5.0kb downstream 5700 true Chr09: 9006069-9011768 Phaseolus vulgaris
Phvul.009G045500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9006069-9011068 Phaseolus vulgaris
Phvul.009G045500 10.0kb upstream 10.0kb upstream 10700 true Chr09: 9011069-9021768 Phaseolus vulgaris
Phvul.009G045500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9011769-9021768 Phaseolus vulgaris
Phvul.009G045500 10.0kb downstream 10.0kb downstream 10700 true Chr09: 9001069-9011768 Phaseolus vulgaris
Phvul.009G045500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9001069-9011068 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791996 5273 Angiosperm View MSA
122312002 5265 Fabidae View MSA
124069631 5270 Rosid View MSA
123627876 5271 Pentapetalae View MSA
122795832 5272 Eudicot View MSA
121063260 5274 Embryophyte View MSA
123103022 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.562317 0.0 2.33255    
cufflinks 1.06583 0.0 4.20644    
cufflinks 0.643014 0.0 2.63535    
cufflinks 1.93209 0.0 7.28078    
cufflinks 1.78858 0.0 6.84864    
cufflinks 0.848742 0.0 3.40721    
cufflinks 1.56981 0.0 6.00503    
cufflinks 0.695689 0.0 2.8352    
cufflinks 1.47919 0.0 5.68855    
cufflinks 0.0522637 0.0 0.279553 Low Low
cufflinks 2.60575 0.0 9.61859   High

0 Strain