Gene : Phvul.009G045800 P. vulgaris v2.1
Defline:  (1 of 4) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  459
Name:  ? Phvul.009G045800 Secondary Identifier:  ? PAC:37148649
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G045800 0.5kb upstream 0.5kb upstream 1885 true Chr09: 9022625-9024509 Phaseolus vulgaris
Phvul.009G045800 0.5kb upstream 0.5kb upstream 500 false Chr09: 9022625-9023124 Phaseolus vulgaris
Phvul.009G045800 0.5kb downstream 0.5kb downstream 1885 true Chr09: 9023125-9025009 Phaseolus vulgaris
Phvul.009G045800 0.5kb downstream 0.5kb downstream 500 false Chr09: 9024510-9025009 Phaseolus vulgaris
Phvul.009G045800 1.0kb upstream 1.0kb upstream 2385 true Chr09: 9022125-9024509 Phaseolus vulgaris
Phvul.009G045800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9022125-9023124 Phaseolus vulgaris
Phvul.009G045800 1.0kb downstream 1.0kb downstream 2385 true Chr09: 9023125-9025509 Phaseolus vulgaris
Phvul.009G045800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9024510-9025509 Phaseolus vulgaris
Phvul.009G045800 2.0kb upstream 2.0kb upstream 3385 true Chr09: 9021125-9024509 Phaseolus vulgaris
Phvul.009G045800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9021125-9023124 Phaseolus vulgaris
Phvul.009G045800 2.0kb downstream 2.0kb downstream 3385 true Chr09: 9023125-9026509 Phaseolus vulgaris
Phvul.009G045800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9024510-9026509 Phaseolus vulgaris
Phvul.009G045800 5.0kb upstream 5.0kb upstream 6385 true Chr09: 9018125-9024509 Phaseolus vulgaris
Phvul.009G045800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9018125-9023124 Phaseolus vulgaris
Phvul.009G045800 5.0kb downstream 5.0kb downstream 6385 true Chr09: 9023125-9029509 Phaseolus vulgaris
Phvul.009G045800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9024510-9029509 Phaseolus vulgaris
Phvul.009G045800 10.0kb upstream 10.0kb upstream 11385 true Chr09: 9013125-9024509 Phaseolus vulgaris
Phvul.009G045800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9013125-9023124 Phaseolus vulgaris
Phvul.009G045800 10.0kb downstream 10.0kb downstream 11385 true Chr09: 9023125-9034509 Phaseolus vulgaris
Phvul.009G045800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9024510-9034509 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314972 5265 Fabidae View MSA
124074239 5270 Rosid View MSA
123751356 5271 Pentapetalae View MSA
122787708 5272 Eudicot View MSA
122049908 5273 Angiosperm View MSA
121345630 5274 Embryophyte View MSA
123424644 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 260.08 0.0 710.223 High  
cufflinks 387.694 0.0 1104.51 High  
cufflinks 208.267 0.0 555.94 High  
cufflinks 430.648 0.0 1256.67 High  
cufflinks 391.191 0.0 1119.17 High  
cufflinks 183.22 0.0 485.326 High Low
cufflinks 273.019 0.0 752.419 High  
cufflinks 308.26 0.0 854.338 High  
cufflinks 429.477 0.0 1246.39 High  
cufflinks 116.05 0.0 300.867 High Low
cufflinks 372.724 0.0 1061.28 High  

0 Strain