Gene : Phvul.006G156700 P. vulgaris v2.1
Defline:  (1 of 8) K15813 - beta-amyrin synthase (LUP4) Genomic Order:  1565
Name:  ? Phvul.006G156700 Secondary Identifier:  ? PAC:37173426
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5203 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G156700 0.5kb upstream 0.5kb upstream 8110 true Chr06: 26183497-26191606 Phaseolus vulgaris
Phvul.006G156700 0.5kb upstream 0.5kb upstream 500 false Chr06: 26183497-26183996 Phaseolus vulgaris
Phvul.006G156700 0.5kb downstream 0.5kb downstream 8110 true Chr06: 26183997-26192106 Phaseolus vulgaris
Phvul.006G156700 0.5kb downstream 0.5kb downstream 500 false Chr06: 26191607-26192106 Phaseolus vulgaris
Phvul.006G156700 1.0kb upstream 1.0kb upstream 8610 true Chr06: 26182997-26191606 Phaseolus vulgaris
Phvul.006G156700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 26182997-26183996 Phaseolus vulgaris
Phvul.006G156700 1.0kb downstream 1.0kb downstream 8610 true Chr06: 26183997-26192606 Phaseolus vulgaris
Phvul.006G156700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 26191607-26192606 Phaseolus vulgaris
Phvul.006G156700 2.0kb upstream 2.0kb upstream 9610 true Chr06: 26181997-26191606 Phaseolus vulgaris
Phvul.006G156700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 26181997-26183996 Phaseolus vulgaris
Phvul.006G156700 2.0kb downstream 2.0kb downstream 9610 true Chr06: 26183997-26193606 Phaseolus vulgaris
Phvul.006G156700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 26191607-26193606 Phaseolus vulgaris
Phvul.006G156700 5.0kb upstream 5.0kb upstream 12610 true Chr06: 26178997-26191606 Phaseolus vulgaris
Phvul.006G156700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 26178997-26183996 Phaseolus vulgaris
Phvul.006G156700 5.0kb downstream 5.0kb downstream 12610 true Chr06: 26183997-26196606 Phaseolus vulgaris
Phvul.006G156700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 26191607-26196606 Phaseolus vulgaris
Phvul.006G156700 10.0kb upstream 10.0kb upstream 17610 true Chr06: 26173997-26191606 Phaseolus vulgaris
Phvul.006G156700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 26173997-26183996 Phaseolus vulgaris
Phvul.006G156700 10.0kb downstream 10.0kb downstream 17610 true Chr06: 26183997-26201606 Phaseolus vulgaris
Phvul.006G156700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 26191607-26201606 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028235 5273 Angiosperm View MSA
122315387 5265 Fabidae View MSA
124075304 5270 Rosid View MSA
123750414 5271 Pentapetalae View MSA
122773643 5272 Eudicot View MSA
121297756 5274 Embryophyte View MSA
123335781 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.11133 0.0 3.9389    
cufflinks 12.1946 0.0 34.5869    
cufflinks 11.753 0.0 41.009    
cufflinks 4.15642 0.0 14.0277    
cufflinks 8.82545 0.0 26.1338    
cufflinks 18.3686 0.0 51.2453    
cufflinks 0.0434327 0.0 0.196061 Low Low
cufflinks 0.0201588 0.0 0.0949843 Low Low
cufflinks 0.0323663 0.0 0.149361 Low Low
cufflinks 5.40873 0.0 17.0955    
cufflinks 8.87684 0.0 26.1723    

0 Strain