Gene : Phvul.006G140500 P. vulgaris v2.1
Defline:  (1 of 16) PF03101//PF04434//PF10551 - FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1400
Name:  ? Phvul.006G140500 Secondary Identifier:  ? PAC:37173769
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G140500 0.5kb upstream 0.5kb upstream 3363 true Chr06: 24718279-24721641 Phaseolus vulgaris
Phvul.006G140500 0.5kb upstream 0.5kb upstream 500 false Chr06: 24718279-24718778 Phaseolus vulgaris
Phvul.006G140500 0.5kb downstream 0.5kb downstream 3363 true Chr06: 24718779-24722141 Phaseolus vulgaris
Phvul.006G140500 0.5kb downstream 0.5kb downstream 500 false Chr06: 24721642-24722141 Phaseolus vulgaris
Phvul.006G140500 1.0kb upstream 1.0kb upstream 3863 true Chr06: 24717779-24721641 Phaseolus vulgaris
Phvul.006G140500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24717779-24718778 Phaseolus vulgaris
Phvul.006G140500 1.0kb downstream 1.0kb downstream 3863 true Chr06: 24718779-24722641 Phaseolus vulgaris
Phvul.006G140500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24721642-24722641 Phaseolus vulgaris
Phvul.006G140500 2.0kb upstream 2.0kb upstream 4863 true Chr06: 24716779-24721641 Phaseolus vulgaris
Phvul.006G140500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24716779-24718778 Phaseolus vulgaris
Phvul.006G140500 2.0kb downstream 2.0kb downstream 4863 true Chr06: 24718779-24723641 Phaseolus vulgaris
Phvul.006G140500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24721642-24723641 Phaseolus vulgaris
Phvul.006G140500 5.0kb upstream 5.0kb upstream 7863 true Chr06: 24713779-24721641 Phaseolus vulgaris
Phvul.006G140500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24713779-24718778 Phaseolus vulgaris
Phvul.006G140500 5.0kb downstream 5.0kb downstream 7863 true Chr06: 24718779-24726641 Phaseolus vulgaris
Phvul.006G140500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24721642-24726641 Phaseolus vulgaris
Phvul.006G140500 10.0kb upstream 10.0kb upstream 12863 true Chr06: 24708779-24721641 Phaseolus vulgaris
Phvul.006G140500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24708779-24718778 Phaseolus vulgaris
Phvul.006G140500 10.0kb downstream 10.0kb downstream 12863 true Chr06: 24718779-24731641 Phaseolus vulgaris
Phvul.006G140500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24721642-24731641 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300879 5265 Fabidae View MSA
124069988 5270 Rosid View MSA
123752178 5271 Pentapetalae View MSA
122796628 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.69682 0.0 12.6466    
cufflinks 4.79824 0.0 18.5377    
cufflinks 7.04373 0.0 24.957   High
cufflinks 3.37282 0.0 12.1807   Low
cufflinks 4.26907 0.0 14.7277    
cufflinks 6.34336 0.0 22.9202   High
cufflinks 4.47672 0.0 17.4644    
cufflinks 4.83982 0.0 18.6529    
cufflinks 3.50957 0.0 14.694    
cufflinks 6.22951 0.0 22.5988   High
cufflinks 3.02632 0.0 11.401   Low

0 Strain