Gene : Phvul.006G138400 P. vulgaris v2.1
Defline:  (1 of 3) K11267 - sister chromatid cohesion protein PDS5 (PDS5) Genomic Order:  1378
Name:  ? Phvul.006G138400 Secondary Identifier:  ? PAC:37172702
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G138400 0.5kb upstream 0.5kb upstream 17675 true Chr06: 24546917-24564591 Phaseolus vulgaris
Phvul.006G138400 0.5kb upstream 0.5kb upstream 500 false Chr06: 24564092-24564591 Phaseolus vulgaris
Phvul.006G138400 0.5kb downstream 0.5kb downstream 17675 true Chr06: 24546417-24564091 Phaseolus vulgaris
Phvul.006G138400 0.5kb downstream 0.5kb downstream 500 false Chr06: 24546417-24546916 Phaseolus vulgaris
Phvul.006G138400 1.0kb upstream 1.0kb upstream 18175 true Chr06: 24546917-24565091 Phaseolus vulgaris
Phvul.006G138400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24564092-24565091 Phaseolus vulgaris
Phvul.006G138400 1.0kb downstream 1.0kb downstream 18175 true Chr06: 24545917-24564091 Phaseolus vulgaris
Phvul.006G138400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24545917-24546916 Phaseolus vulgaris
Phvul.006G138400 2.0kb upstream 2.0kb upstream 19175 true Chr06: 24546917-24566091 Phaseolus vulgaris
Phvul.006G138400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24564092-24566091 Phaseolus vulgaris
Phvul.006G138400 2.0kb downstream 2.0kb downstream 19175 true Chr06: 24544917-24564091 Phaseolus vulgaris
Phvul.006G138400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24544917-24546916 Phaseolus vulgaris
Phvul.006G138400 5.0kb upstream 5.0kb upstream 22175 true Chr06: 24546917-24569091 Phaseolus vulgaris
Phvul.006G138400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24564092-24569091 Phaseolus vulgaris
Phvul.006G138400 5.0kb downstream 5.0kb downstream 22175 true Chr06: 24541917-24564091 Phaseolus vulgaris
Phvul.006G138400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24541917-24546916 Phaseolus vulgaris
Phvul.006G138400 10.0kb upstream 10.0kb upstream 27175 true Chr06: 24546917-24574091 Phaseolus vulgaris
Phvul.006G138400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24564092-24574091 Phaseolus vulgaris
Phvul.006G138400 10.0kb downstream 10.0kb downstream 27175 true Chr06: 24536917-24564091 Phaseolus vulgaris
Phvul.006G138400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24536917-24546916 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313957 5265 Fabidae View MSA
124050365 5270 Rosid View MSA
123751291 5271 Pentapetalae View MSA
122791249 5272 Eudicot View MSA
122045093 5273 Angiosperm View MSA
121348998 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.28706 0.0 11.3772   Low
cufflinks 8.76566 0.0 27.9891    
cufflinks 26.0239 0.0 97.0203    
cufflinks 2.98206 0.0 10.7352   Low
cufflinks 8.86941 0.0 28.4463    
cufflinks 32.1075 0.0 124.802   High
cufflinks 22.7121 0.0 81.3401    
cufflinks 18.7091 0.0 65.381    
cufflinks 19.3723 0.0 66.8259    
cufflinks 15.0876 0.0 50.3815    
cufflinks 5.49938 0.0 17.9751    

0 Strain