Gene : Phvul.006G138600 P. vulgaris v2.1
Defline:  (1 of 17) PF14547 - Hydrophobic seed protein (Hydrophob_seed) Genomic Order:  1380
Name:  ? Phvul.006G138600 Secondary Identifier:  ? PAC:37173598
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G138600 0.5kb upstream 0.5kb upstream 1052 true Chr06: 24584276-24585327 Phaseolus vulgaris
Phvul.006G138600 0.5kb upstream 0.5kb upstream 500 false Chr06: 24584276-24584775 Phaseolus vulgaris
Phvul.006G138600 0.5kb downstream 0.5kb downstream 1052 true Chr06: 24584776-24585827 Phaseolus vulgaris
Phvul.006G138600 0.5kb downstream 0.5kb downstream 500 false Chr06: 24585328-24585827 Phaseolus vulgaris
Phvul.006G138600 1.0kb upstream 1.0kb upstream 1552 true Chr06: 24583776-24585327 Phaseolus vulgaris
Phvul.006G138600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24583776-24584775 Phaseolus vulgaris
Phvul.006G138600 1.0kb downstream 1.0kb downstream 1552 true Chr06: 24584776-24586327 Phaseolus vulgaris
Phvul.006G138600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24585328-24586327 Phaseolus vulgaris
Phvul.006G138600 2.0kb upstream 2.0kb upstream 2552 true Chr06: 24582776-24585327 Phaseolus vulgaris
Phvul.006G138600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24582776-24584775 Phaseolus vulgaris
Phvul.006G138600 2.0kb downstream 2.0kb downstream 2552 true Chr06: 24584776-24587327 Phaseolus vulgaris
Phvul.006G138600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24585328-24587327 Phaseolus vulgaris
Phvul.006G138600 5.0kb upstream 5.0kb upstream 5552 true Chr06: 24579776-24585327 Phaseolus vulgaris
Phvul.006G138600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24579776-24584775 Phaseolus vulgaris
Phvul.006G138600 5.0kb downstream 5.0kb downstream 5552 true Chr06: 24584776-24590327 Phaseolus vulgaris
Phvul.006G138600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24585328-24590327 Phaseolus vulgaris
Phvul.006G138600 10.0kb upstream 10.0kb upstream 10552 true Chr06: 24574776-24585327 Phaseolus vulgaris
Phvul.006G138600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24574776-24584775 Phaseolus vulgaris
Phvul.006G138600 10.0kb downstream 10.0kb downstream 10552 true Chr06: 24584776-24595327 Phaseolus vulgaris
Phvul.006G138600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24585328-24595327 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618085 5273 Angiosperm View MSA
122254929 5265 Fabidae View MSA
123996871 5270 Rosid View MSA
123571265 5271 Pentapetalae View MSA
122605993 5272 Eudicot View MSA
120890202 5274 Embryophyte View MSA
122930874 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1856 0.0 46.5169    
cufflinks 6.0132 0.0 20.5699    
cufflinks 1.6322 0.0 6.27678    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.0506 0.0 49.0239    
cufflinks 6.45982 0.0 21.9089    
cufflinks 0.11748 0.0 0.575362 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 267.197 0.0 701.495 High High
cufflinks 14.5975 0.0 45.2427    

0 Strain