Gene : Phvul.006G143400 P. vulgaris v2.1
Defline:  (1 of 12) PF02179 - BAG domain (BAG) Genomic Order:  1429
Name:  ? Phvul.006G143400 Secondary Identifier:  ? PAC:37173666
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G143400 0.5kb upstream 0.5kb upstream 1243 true Chr06: 24935640-24936882 Phaseolus vulgaris
Phvul.006G143400 0.5kb upstream 0.5kb upstream 500 false Chr06: 24936383-24936882 Phaseolus vulgaris
Phvul.006G143400 0.5kb downstream 0.5kb downstream 1243 true Chr06: 24935140-24936382 Phaseolus vulgaris
Phvul.006G143400 0.5kb downstream 0.5kb downstream 500 false Chr06: 24935140-24935639 Phaseolus vulgaris
Phvul.006G143400 1.0kb upstream 1.0kb upstream 1743 true Chr06: 24935640-24937382 Phaseolus vulgaris
Phvul.006G143400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24936383-24937382 Phaseolus vulgaris
Phvul.006G143400 1.0kb downstream 1.0kb downstream 1743 true Chr06: 24934640-24936382 Phaseolus vulgaris
Phvul.006G143400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24934640-24935639 Phaseolus vulgaris
Phvul.006G143400 2.0kb upstream 2.0kb upstream 2743 true Chr06: 24935640-24938382 Phaseolus vulgaris
Phvul.006G143400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24936383-24938382 Phaseolus vulgaris
Phvul.006G143400 2.0kb downstream 2.0kb downstream 2743 true Chr06: 24933640-24936382 Phaseolus vulgaris
Phvul.006G143400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24933640-24935639 Phaseolus vulgaris
Phvul.006G143400 5.0kb upstream 5.0kb upstream 5743 true Chr06: 24935640-24941382 Phaseolus vulgaris
Phvul.006G143400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24936383-24941382 Phaseolus vulgaris
Phvul.006G143400 5.0kb downstream 5.0kb downstream 5743 true Chr06: 24930640-24936382 Phaseolus vulgaris
Phvul.006G143400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24930640-24935639 Phaseolus vulgaris
Phvul.006G143400 10.0kb upstream 10.0kb upstream 10743 true Chr06: 24935640-24946382 Phaseolus vulgaris
Phvul.006G143400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24936383-24946382 Phaseolus vulgaris
Phvul.006G143400 10.0kb downstream 10.0kb downstream 10743 true Chr06: 24925640-24936382 Phaseolus vulgaris
Phvul.006G143400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24925640-24935639 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301397 5265 Fabidae View MSA
124061385 5270 Rosid View MSA
123751971 5271 Pentapetalae View MSA
122790108 5272 Eudicot View MSA
122046855 5273 Angiosperm View MSA
121348500 5274 Embryophyte View MSA
123380884 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.939 0.0 46.7624    
cufflinks 12.9623 0.0 36.7385    
cufflinks 7.94761 0.0 23.8971   Low
cufflinks 20.1183 0.0 54.0702    
cufflinks 28.84 0.0 75.9219   High
cufflinks 7.96501 0.0 23.8485   Low
cufflinks 12.0916 0.0 34.1878    
cufflinks 6.29843 0.0 19.3698   Low
cufflinks 8.93389 0.0 26.0535    
cufflinks 27.4657 0.0 72.8307   High
cufflinks 32.3027 0.0 84.5277   High

0 Strain