Gene : Phvul.006G141000 P. vulgaris v2.1
Genomic Order:  1405 Name:  ? Phvul.006G141000
Secondary Identifier:  ? PAC:37172261
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G141000 0.5kb upstream 0.5kb upstream 3153 true Chr06: 24753940-24757092 Phaseolus vulgaris
Phvul.006G141000 0.5kb upstream 0.5kb upstream 500 false Chr06: 24753940-24754439 Phaseolus vulgaris
Phvul.006G141000 0.5kb downstream 0.5kb downstream 3153 true Chr06: 24754440-24757592 Phaseolus vulgaris
Phvul.006G141000 0.5kb downstream 0.5kb downstream 500 false Chr06: 24757093-24757592 Phaseolus vulgaris
Phvul.006G141000 1.0kb upstream 1.0kb upstream 3653 true Chr06: 24753440-24757092 Phaseolus vulgaris
Phvul.006G141000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24753440-24754439 Phaseolus vulgaris
Phvul.006G141000 1.0kb downstream 1.0kb downstream 3653 true Chr06: 24754440-24758092 Phaseolus vulgaris
Phvul.006G141000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24757093-24758092 Phaseolus vulgaris
Phvul.006G141000 2.0kb upstream 2.0kb upstream 4653 true Chr06: 24752440-24757092 Phaseolus vulgaris
Phvul.006G141000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24752440-24754439 Phaseolus vulgaris
Phvul.006G141000 2.0kb downstream 2.0kb downstream 4653 true Chr06: 24754440-24759092 Phaseolus vulgaris
Phvul.006G141000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24757093-24759092 Phaseolus vulgaris
Phvul.006G141000 5.0kb upstream 5.0kb upstream 7653 true Chr06: 24749440-24757092 Phaseolus vulgaris
Phvul.006G141000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24749440-24754439 Phaseolus vulgaris
Phvul.006G141000 5.0kb downstream 5.0kb downstream 7653 true Chr06: 24754440-24762092 Phaseolus vulgaris
Phvul.006G141000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24757093-24762092 Phaseolus vulgaris
Phvul.006G141000 10.0kb upstream 10.0kb upstream 12653 true Chr06: 24744440-24757092 Phaseolus vulgaris
Phvul.006G141000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24744440-24754439 Phaseolus vulgaris
Phvul.006G141000 10.0kb downstream 10.0kb downstream 12653 true Chr06: 24754440-24767092 Phaseolus vulgaris
Phvul.006G141000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24757093-24767092 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305284 5265 Fabidae View MSA
124068215 5270 Rosid View MSA
123738614 5271 Pentapetalae View MSA
122787262 5272 Eudicot View MSA
122042114 5273 Angiosperm View MSA
121309925 5274 Embryophyte View MSA
123347555 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.47159 0.0 13.1468    
cufflinks 16.2795 0.0 42.7712   High
cufflinks 2.88457 0.0 8.91497    
cufflinks 3.29771 0.0 10.0432    
cufflinks 6.77473 0.0 19.1319    
cufflinks 8.62156 0.0 23.7566    
cufflinks 5.21882 0.0 15.0159    
cufflinks 4.3459 0.0 12.8302    
cufflinks 4.59104 0.0 13.4044    
cufflinks 0.789953 0.0 2.82345   Low
cufflinks 6.74983 0.0 19.0272    

0 Strain