Gene : Phvul.006G145100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  1446
Name:  ? Phvul.006G145100 Secondary Identifier:  ? PAC:37174034
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G145100 0.5kb upstream 0.5kb upstream 2517 true Chr06: 25094800-25097316 Phaseolus vulgaris
Phvul.006G145100 0.5kb upstream 0.5kb upstream 500 false Chr06: 25094800-25095299 Phaseolus vulgaris
Phvul.006G145100 0.5kb downstream 0.5kb downstream 2517 true Chr06: 25095300-25097816 Phaseolus vulgaris
Phvul.006G145100 0.5kb downstream 0.5kb downstream 500 false Chr06: 25097317-25097816 Phaseolus vulgaris
Phvul.006G145100 1.0kb upstream 1.0kb upstream 3017 true Chr06: 25094300-25097316 Phaseolus vulgaris
Phvul.006G145100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25094300-25095299 Phaseolus vulgaris
Phvul.006G145100 1.0kb downstream 1.0kb downstream 3017 true Chr06: 25095300-25098316 Phaseolus vulgaris
Phvul.006G145100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25097317-25098316 Phaseolus vulgaris
Phvul.006G145100 2.0kb upstream 2.0kb upstream 4017 true Chr06: 25093300-25097316 Phaseolus vulgaris
Phvul.006G145100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25093300-25095299 Phaseolus vulgaris
Phvul.006G145100 2.0kb downstream 2.0kb downstream 4017 true Chr06: 25095300-25099316 Phaseolus vulgaris
Phvul.006G145100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25097317-25099316 Phaseolus vulgaris
Phvul.006G145100 5.0kb upstream 5.0kb upstream 7017 true Chr06: 25090300-25097316 Phaseolus vulgaris
Phvul.006G145100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25090300-25095299 Phaseolus vulgaris
Phvul.006G145100 5.0kb downstream 5.0kb downstream 7017 true Chr06: 25095300-25102316 Phaseolus vulgaris
Phvul.006G145100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25097317-25102316 Phaseolus vulgaris
Phvul.006G145100 10.0kb upstream 10.0kb upstream 12017 true Chr06: 25085300-25097316 Phaseolus vulgaris
Phvul.006G145100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25085300-25095299 Phaseolus vulgaris
Phvul.006G145100 10.0kb downstream 10.0kb downstream 12017 true Chr06: 25095300-25107316 Phaseolus vulgaris
Phvul.006G145100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25097317-25107316 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303494 5265 Fabidae View MSA
124073246 5270 Rosid View MSA
123747312 5271 Pentapetalae View MSA
122796946 5272 Eudicot View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7207.5 0.0 52131.4 High High
cufflinks 185.729 0.0 536.532 High  
cufflinks 372.068 0.0 1189.43 High  
cufflinks 204.612 0.0 600.518 High  
cufflinks 68.1177 0.0 178.941 High  
cufflinks 65.0975 0.0 170.425 High  
cufflinks 63.3683 0.0 166.165 High  
cufflinks 31.5358 0.0 81.6373 High Low
cufflinks 45.3063 0.0 117.37 High  
cufflinks 422.943 0.0 1401.33 High  
cufflinks 68.6363 0.0 180.702 High  

0 Strain