Gene : Phvul.006G143600 P. vulgaris v2.1
Defline:  (1 of 2) K03138 - transcription initiation factor TFIIF subunit alpha (TFIIF1, GTF2F1, TFG1) Genomic Order:  1431
Name:  ? Phvul.006G143600 Secondary Identifier:  ? PAC:37172027
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G143600 0.5kb upstream 0.5kb upstream 6733 true Chr06: 24945382-24952114 Phaseolus vulgaris
Phvul.006G143600 0.5kb upstream 0.5kb upstream 500 false Chr06: 24945382-24945881 Phaseolus vulgaris
Phvul.006G143600 0.5kb downstream 0.5kb downstream 6733 true Chr06: 24945882-24952614 Phaseolus vulgaris
Phvul.006G143600 0.5kb downstream 0.5kb downstream 500 false Chr06: 24952115-24952614 Phaseolus vulgaris
Phvul.006G143600 1.0kb upstream 1.0kb upstream 7233 true Chr06: 24944882-24952114 Phaseolus vulgaris
Phvul.006G143600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24944882-24945881 Phaseolus vulgaris
Phvul.006G143600 1.0kb downstream 1.0kb downstream 7233 true Chr06: 24945882-24953114 Phaseolus vulgaris
Phvul.006G143600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24952115-24953114 Phaseolus vulgaris
Phvul.006G143600 2.0kb upstream 2.0kb upstream 8233 true Chr06: 24943882-24952114 Phaseolus vulgaris
Phvul.006G143600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24943882-24945881 Phaseolus vulgaris
Phvul.006G143600 2.0kb downstream 2.0kb downstream 8233 true Chr06: 24945882-24954114 Phaseolus vulgaris
Phvul.006G143600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24952115-24954114 Phaseolus vulgaris
Phvul.006G143600 5.0kb upstream 5.0kb upstream 11233 true Chr06: 24940882-24952114 Phaseolus vulgaris
Phvul.006G143600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24940882-24945881 Phaseolus vulgaris
Phvul.006G143600 5.0kb downstream 5.0kb downstream 11233 true Chr06: 24945882-24957114 Phaseolus vulgaris
Phvul.006G143600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24952115-24957114 Phaseolus vulgaris
Phvul.006G143600 10.0kb upstream 10.0kb upstream 16233 true Chr06: 24935882-24952114 Phaseolus vulgaris
Phvul.006G143600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24935882-24945881 Phaseolus vulgaris
Phvul.006G143600 10.0kb downstream 10.0kb downstream 16233 true Chr06: 24945882-24962114 Phaseolus vulgaris
Phvul.006G143600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24952115-24962114 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314295 5265 Fabidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1118 0.0 39.0645    
cufflinks 17.7384 0.0 45.9247    
cufflinks 15.6449 0.0 40.4505    
cufflinks 13.6036 0.0 35.2121   Low
cufflinks 16.0953 0.0 41.6039    
cufflinks 16.2172 0.0 41.9477    
cufflinks 18.446 0.0 47.8569    
cufflinks 23.8388 0.0 62.463   High
cufflinks 19.3825 0.0 50.342    
cufflinks 33.9056 0.0 90.3303   High
cufflinks 19.6775 0.0 51.0033    

0 Strain