Gene : Phvul.006G144100 P. vulgaris v2.1
Genomic Order:  1436 Name:  ? Phvul.006G144100
Secondary Identifier:  ? PAC:37172718
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G144100 0.5kb upstream 0.5kb upstream 2163 true Chr06: 24987723-24989885 Phaseolus vulgaris
Phvul.006G144100 0.5kb upstream 0.5kb upstream 500 false Chr06: 24987723-24988222 Phaseolus vulgaris
Phvul.006G144100 0.5kb downstream 0.5kb downstream 2163 true Chr06: 24988223-24990385 Phaseolus vulgaris
Phvul.006G144100 0.5kb downstream 0.5kb downstream 500 false Chr06: 24989886-24990385 Phaseolus vulgaris
Phvul.006G144100 1.0kb upstream 1.0kb upstream 2663 true Chr06: 24987223-24989885 Phaseolus vulgaris
Phvul.006G144100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24987223-24988222 Phaseolus vulgaris
Phvul.006G144100 1.0kb downstream 1.0kb downstream 2663 true Chr06: 24988223-24990885 Phaseolus vulgaris
Phvul.006G144100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24989886-24990885 Phaseolus vulgaris
Phvul.006G144100 2.0kb upstream 2.0kb upstream 3663 true Chr06: 24986223-24989885 Phaseolus vulgaris
Phvul.006G144100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24986223-24988222 Phaseolus vulgaris
Phvul.006G144100 2.0kb downstream 2.0kb downstream 3663 true Chr06: 24988223-24991885 Phaseolus vulgaris
Phvul.006G144100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24989886-24991885 Phaseolus vulgaris
Phvul.006G144100 5.0kb upstream 5.0kb upstream 6663 true Chr06: 24983223-24989885 Phaseolus vulgaris
Phvul.006G144100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24983223-24988222 Phaseolus vulgaris
Phvul.006G144100 5.0kb downstream 5.0kb downstream 6663 true Chr06: 24988223-24994885 Phaseolus vulgaris
Phvul.006G144100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24989886-24994885 Phaseolus vulgaris
Phvul.006G144100 10.0kb upstream 10.0kb upstream 11663 true Chr06: 24978223-24989885 Phaseolus vulgaris
Phvul.006G144100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24978223-24988222 Phaseolus vulgaris
Phvul.006G144100 10.0kb downstream 10.0kb downstream 11663 true Chr06: 24988223-24999885 Phaseolus vulgaris
Phvul.006G144100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24989886-24999885 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312157 5265 Fabidae View MSA
124071789 5270 Rosid View MSA
123751715 5271 Pentapetalae View MSA
122793520 5272 Eudicot View MSA
122049689 5273 Angiosperm View MSA
121311543 5274 Embryophyte View MSA
123348826 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.26912 0.0 25.141    
cufflinks 9.98704 0.0 26.9803    
cufflinks 5.32121 0.0 15.2597   Low
cufflinks 15.2868 0.0 40.0854    
cufflinks 31.4599 0.0 81.4155   High
cufflinks 5.26977 0.0 15.0792   Low
cufflinks 14.8011 0.0 38.7123    
cufflinks 8.38061 0.0 22.8467    
cufflinks 17.5341 0.0 45.5909    
cufflinks 9.64786 0.0 26.1159    
cufflinks 36.0062 0.0 93.5391 High High

0 Strain