Gene : Phvul.006G144600 P. vulgaris v2.1
Defline:  (1 of 3) K13456 - RPM1-interacting protein 4 (RIN4) Genomic Order:  1441
Name:  ? Phvul.006G144600 Secondary Identifier:  ? PAC:37173157
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G144600 0.5kb upstream 0.5kb upstream 2577 true Chr06: 25037008-25039584 Phaseolus vulgaris
Phvul.006G144600 0.5kb upstream 0.5kb upstream 500 false Chr06: 25039085-25039584 Phaseolus vulgaris
Phvul.006G144600 0.5kb downstream 0.5kb downstream 2577 true Chr06: 25036508-25039084 Phaseolus vulgaris
Phvul.006G144600 0.5kb downstream 0.5kb downstream 500 false Chr06: 25036508-25037007 Phaseolus vulgaris
Phvul.006G144600 1.0kb upstream 1.0kb upstream 3077 true Chr06: 25037008-25040084 Phaseolus vulgaris
Phvul.006G144600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25039085-25040084 Phaseolus vulgaris
Phvul.006G144600 1.0kb downstream 1.0kb downstream 3077 true Chr06: 25036008-25039084 Phaseolus vulgaris
Phvul.006G144600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25036008-25037007 Phaseolus vulgaris
Phvul.006G144600 2.0kb upstream 2.0kb upstream 4077 true Chr06: 25037008-25041084 Phaseolus vulgaris
Phvul.006G144600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25039085-25041084 Phaseolus vulgaris
Phvul.006G144600 2.0kb downstream 2.0kb downstream 4077 true Chr06: 25035008-25039084 Phaseolus vulgaris
Phvul.006G144600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25035008-25037007 Phaseolus vulgaris
Phvul.006G144600 5.0kb upstream 5.0kb upstream 7077 true Chr06: 25037008-25044084 Phaseolus vulgaris
Phvul.006G144600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25039085-25044084 Phaseolus vulgaris
Phvul.006G144600 5.0kb downstream 5.0kb downstream 7077 true Chr06: 25032008-25039084 Phaseolus vulgaris
Phvul.006G144600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25032008-25037007 Phaseolus vulgaris
Phvul.006G144600 10.0kb upstream 10.0kb upstream 12077 true Chr06: 25037008-25049084 Phaseolus vulgaris
Phvul.006G144600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25039085-25049084 Phaseolus vulgaris
Phvul.006G144600 10.0kb downstream 10.0kb downstream 12077 true Chr06: 25027008-25039084 Phaseolus vulgaris
Phvul.006G144600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25027008-25037007 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309341 5265 Fabidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.15153 0.0 0.639072 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.57243 0.0 8.27748    
cufflinks 2.09396 0.0 6.89158    
cufflinks 2.44267 0.0 7.90263    
cufflinks 0.0152679 0.0 0.0816662 Low Low
cufflinks 0.23477 0.0 0.951955 Low  

0 Strain