Gene : Phvul.006G144800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31803:SF10 - UBIQUINOL OXIDASE 4, CHLOROPLASTIC/CHROMOPLASTIC Genomic Order:  1443
Name:  ? Phvul.006G144800 Secondary Identifier:  ? PAC:37174142
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-4302 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G144800 0.5kb upstream 0.5kb upstream 4595 true Chr06: 25047744-25052338 Phaseolus vulgaris
Phvul.006G144800 0.5kb upstream 0.5kb upstream 500 false Chr06: 25047744-25048243 Phaseolus vulgaris
Phvul.006G144800 0.5kb downstream 0.5kb downstream 4595 true Chr06: 25048244-25052838 Phaseolus vulgaris
Phvul.006G144800 0.5kb downstream 0.5kb downstream 500 false Chr06: 25052339-25052838 Phaseolus vulgaris
Phvul.006G144800 1.0kb upstream 1.0kb upstream 5095 true Chr06: 25047244-25052338 Phaseolus vulgaris
Phvul.006G144800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25047244-25048243 Phaseolus vulgaris
Phvul.006G144800 1.0kb downstream 1.0kb downstream 5095 true Chr06: 25048244-25053338 Phaseolus vulgaris
Phvul.006G144800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25052339-25053338 Phaseolus vulgaris
Phvul.006G144800 2.0kb upstream 2.0kb upstream 6095 true Chr06: 25046244-25052338 Phaseolus vulgaris
Phvul.006G144800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25046244-25048243 Phaseolus vulgaris
Phvul.006G144800 2.0kb downstream 2.0kb downstream 6095 true Chr06: 25048244-25054338 Phaseolus vulgaris
Phvul.006G144800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25052339-25054338 Phaseolus vulgaris
Phvul.006G144800 5.0kb upstream 5.0kb upstream 9095 true Chr06: 25043244-25052338 Phaseolus vulgaris
Phvul.006G144800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25043244-25048243 Phaseolus vulgaris
Phvul.006G144800 5.0kb downstream 5.0kb downstream 9095 true Chr06: 25048244-25057338 Phaseolus vulgaris
Phvul.006G144800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25052339-25057338 Phaseolus vulgaris
Phvul.006G144800 10.0kb upstream 10.0kb upstream 14095 true Chr06: 25038244-25052338 Phaseolus vulgaris
Phvul.006G144800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25038244-25048243 Phaseolus vulgaris
Phvul.006G144800 10.0kb downstream 10.0kb downstream 14095 true Chr06: 25048244-25062338 Phaseolus vulgaris
Phvul.006G144800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25052339-25062338 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299462 5265 Fabidae View MSA
124073832 5270 Rosid View MSA
123736785 5271 Pentapetalae View MSA
122786368 5272 Eudicot View MSA
122045919 5273 Angiosperm View MSA
121344765 5274 Embryophyte View MSA
123427941 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.4558 0.0 182.167 High High
cufflinks 5.83467 0.0 17.2809    
cufflinks 27.6527 0.0 71.8528    
cufflinks 16.829 0.0 45.1942    
cufflinks 3.82656 0.0 11.9847   Low
cufflinks 9.40975 0.0 26.4753    
cufflinks 8.05066 0.0 23.0523    
cufflinks 29.8773 0.0 77.4807 High High
cufflinks 7.87575 0.0 22.6623    
cufflinks 9.0802 0.0 25.6588    
cufflinks 5.07475 0.0 15.3653    

0 Strain