Gene : Phvul.006G144700 P. vulgaris v2.1
Defline:  (1 of 6) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  1442
Name:  ? Phvul.006G144700 Secondary Identifier:  ? PAC:37173667
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G144700 0.5kb upstream 0.5kb upstream 4222 true Chr06: 25039994-25044215 Phaseolus vulgaris
Phvul.006G144700 0.5kb upstream 0.5kb upstream 500 false Chr06: 25043716-25044215 Phaseolus vulgaris
Phvul.006G144700 0.5kb downstream 0.5kb downstream 4222 true Chr06: 25039494-25043715 Phaseolus vulgaris
Phvul.006G144700 0.5kb downstream 0.5kb downstream 500 false Chr06: 25039494-25039993 Phaseolus vulgaris
Phvul.006G144700 1.0kb upstream 1.0kb upstream 4722 true Chr06: 25039994-25044715 Phaseolus vulgaris
Phvul.006G144700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25043716-25044715 Phaseolus vulgaris
Phvul.006G144700 1.0kb downstream 1.0kb downstream 4722 true Chr06: 25038994-25043715 Phaseolus vulgaris
Phvul.006G144700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25038994-25039993 Phaseolus vulgaris
Phvul.006G144700 2.0kb upstream 2.0kb upstream 5722 true Chr06: 25039994-25045715 Phaseolus vulgaris
Phvul.006G144700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25043716-25045715 Phaseolus vulgaris
Phvul.006G144700 2.0kb downstream 2.0kb downstream 5722 true Chr06: 25037994-25043715 Phaseolus vulgaris
Phvul.006G144700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25037994-25039993 Phaseolus vulgaris
Phvul.006G144700 5.0kb upstream 5.0kb upstream 8722 true Chr06: 25039994-25048715 Phaseolus vulgaris
Phvul.006G144700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25043716-25048715 Phaseolus vulgaris
Phvul.006G144700 5.0kb downstream 5.0kb downstream 8722 true Chr06: 25034994-25043715 Phaseolus vulgaris
Phvul.006G144700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25034994-25039993 Phaseolus vulgaris
Phvul.006G144700 10.0kb upstream 10.0kb upstream 13722 true Chr06: 25039994-25053715 Phaseolus vulgaris
Phvul.006G144700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25043716-25053715 Phaseolus vulgaris
Phvul.006G144700 10.0kb downstream 10.0kb downstream 13722 true Chr06: 25029994-25043715 Phaseolus vulgaris
Phvul.006G144700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25029994-25039993 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041284 5273 Angiosperm View MSA
122300274 5265 Fabidae View MSA
124069987 5270 Rosid View MSA
123742402 5271 Pentapetalae View MSA
122770282 5272 Eudicot View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.99004 0.0 24.905    
cufflinks 2.19993 0.0 9.71863   Low
cufflinks 3.39538 0.0 12.7163    
cufflinks 2.25913 0.0 7.56801   Low
cufflinks 7.95855 0.0 28.8128    
cufflinks 4.76624 0.0 16.2162    
cufflinks 26.7922 0.0 84.878   High
cufflinks 15.7251 0.0 50.7794    
cufflinks 24.5203 0.0 77.6225   High
cufflinks 10.2423 0.0 35.2369    
cufflinks 7.69935 0.0 24.1382    

0 Strain