Gene : Phvul.006G147300 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33227:SF4 - F12F1.21 PROTEIN Genomic Order:  1468
Name:  ? Phvul.006G147300 Secondary Identifier:  ? PAC:37172638
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G147300 0.5kb upstream 0.5kb upstream 980 true Chr06: 25275614-25276593 Phaseolus vulgaris
Phvul.006G147300 0.5kb upstream 0.5kb upstream 500 false Chr06: 25275614-25276113 Phaseolus vulgaris
Phvul.006G147300 0.5kb downstream 0.5kb downstream 980 true Chr06: 25276114-25277093 Phaseolus vulgaris
Phvul.006G147300 0.5kb downstream 0.5kb downstream 500 false Chr06: 25276594-25277093 Phaseolus vulgaris
Phvul.006G147300 1.0kb upstream 1.0kb upstream 1480 true Chr06: 25275114-25276593 Phaseolus vulgaris
Phvul.006G147300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25275114-25276113 Phaseolus vulgaris
Phvul.006G147300 1.0kb downstream 1.0kb downstream 1480 true Chr06: 25276114-25277593 Phaseolus vulgaris
Phvul.006G147300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25276594-25277593 Phaseolus vulgaris
Phvul.006G147300 2.0kb upstream 2.0kb upstream 2480 true Chr06: 25274114-25276593 Phaseolus vulgaris
Phvul.006G147300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25274114-25276113 Phaseolus vulgaris
Phvul.006G147300 2.0kb downstream 2.0kb downstream 2480 true Chr06: 25276114-25278593 Phaseolus vulgaris
Phvul.006G147300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25276594-25278593 Phaseolus vulgaris
Phvul.006G147300 5.0kb upstream 5.0kb upstream 5480 true Chr06: 25271114-25276593 Phaseolus vulgaris
Phvul.006G147300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25271114-25276113 Phaseolus vulgaris
Phvul.006G147300 5.0kb downstream 5.0kb downstream 5480 true Chr06: 25276114-25281593 Phaseolus vulgaris
Phvul.006G147300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25276594-25281593 Phaseolus vulgaris
Phvul.006G147300 10.0kb upstream 10.0kb upstream 10480 true Chr06: 25266114-25276593 Phaseolus vulgaris
Phvul.006G147300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25266114-25276113 Phaseolus vulgaris
Phvul.006G147300 10.0kb downstream 10.0kb downstream 10480 true Chr06: 25276114-25286593 Phaseolus vulgaris
Phvul.006G147300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25276594-25286593 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311487 5265 Fabidae View MSA
124071868 5270 Rosid View MSA
123753297 5271 Pentapetalae View MSA
122793251 5272 Eudicot View MSA
122045187 5273 Angiosperm View MSA
121350525 5274 Embryophyte View MSA
123381772 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117002 0.0 0.579861 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0982697 0.0 0.497563 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain