Gene : Phvul.009G038000 P. vulgaris v2.1
Defline:  (1 of 24) K04730 - interleukin-1 receptor-associated kinase 1 (IRAK1) Genomic Order:  378
Name:  ? Phvul.009G038000 Secondary Identifier:  ? PAC:37149171
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G038000 0.5kb upstream 0.5kb upstream 2072 true Chr09: 8075843-8077914 Phaseolus vulgaris
Phvul.009G038000 0.5kb upstream 0.5kb upstream 500 false Chr09: 8077415-8077914 Phaseolus vulgaris
Phvul.009G038000 0.5kb downstream 0.5kb downstream 2072 true Chr09: 8075343-8077414 Phaseolus vulgaris
Phvul.009G038000 0.5kb downstream 0.5kb downstream 500 false Chr09: 8075343-8075842 Phaseolus vulgaris
Phvul.009G038000 1.0kb upstream 1.0kb upstream 2572 true Chr09: 8075843-8078414 Phaseolus vulgaris
Phvul.009G038000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8077415-8078414 Phaseolus vulgaris
Phvul.009G038000 1.0kb downstream 1.0kb downstream 2572 true Chr09: 8074843-8077414 Phaseolus vulgaris
Phvul.009G038000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8074843-8075842 Phaseolus vulgaris
Phvul.009G038000 2.0kb upstream 2.0kb upstream 3572 true Chr09: 8075843-8079414 Phaseolus vulgaris
Phvul.009G038000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8077415-8079414 Phaseolus vulgaris
Phvul.009G038000 2.0kb downstream 2.0kb downstream 3572 true Chr09: 8073843-8077414 Phaseolus vulgaris
Phvul.009G038000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8073843-8075842 Phaseolus vulgaris
Phvul.009G038000 5.0kb upstream 5.0kb upstream 6572 true Chr09: 8075843-8082414 Phaseolus vulgaris
Phvul.009G038000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8077415-8082414 Phaseolus vulgaris
Phvul.009G038000 5.0kb downstream 5.0kb downstream 6572 true Chr09: 8070843-8077414 Phaseolus vulgaris
Phvul.009G038000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8070843-8075842 Phaseolus vulgaris
Phvul.009G038000 10.0kb upstream 10.0kb upstream 11572 true Chr09: 8075843-8087414 Phaseolus vulgaris
Phvul.009G038000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8077415-8087414 Phaseolus vulgaris
Phvul.009G038000 10.0kb downstream 10.0kb downstream 11572 true Chr09: 8065843-8077414 Phaseolus vulgaris
Phvul.009G038000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8065843-8075842 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314461 5265 Fabidae View MSA
124061845 5270 Rosid View MSA
123745478 5271 Pentapetalae View MSA
122790450 5272 Eudicot View MSA
122049911 5273 Angiosperm View MSA
121349712 5274 Embryophyte View MSA
123381410 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.338 0.0 24.961    
cufflinks 8.81655 0.0 23.6716    
cufflinks 2.88399 0.0 8.71304   Low
cufflinks 3.66091 0.0 10.6394   Low
cufflinks 8.83268 0.0 23.5755    
cufflinks 5.44929 0.0 15.273    
cufflinks 7.90173 0.0 21.2079    
cufflinks 5.42079 0.0 15.1481    
cufflinks 7.28234 0.0 19.709    
cufflinks 8.81798 0.0 23.6476    
cufflinks 6.71355 0.0 18.2781    

0 Strain