Gene : Phvul.006G147900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13683:SF286 - ASPARTIC PROTEINASE A1-RELATED Genomic Order:  1474
Name:  ? Phvul.006G147900 Secondary Identifier:  ? PAC:37171484
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G147900 0.5kb upstream 0.5kb upstream 4823 true Chr06: 25320375-25325197 Phaseolus vulgaris
Phvul.006G147900 0.5kb upstream 0.5kb upstream 500 false Chr06: 25320375-25320874 Phaseolus vulgaris
Phvul.006G147900 0.5kb downstream 0.5kb downstream 4823 true Chr06: 25320875-25325697 Phaseolus vulgaris
Phvul.006G147900 0.5kb downstream 0.5kb downstream 500 false Chr06: 25325198-25325697 Phaseolus vulgaris
Phvul.006G147900 1.0kb upstream 1.0kb upstream 5323 true Chr06: 25319875-25325197 Phaseolus vulgaris
Phvul.006G147900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25319875-25320874 Phaseolus vulgaris
Phvul.006G147900 1.0kb downstream 1.0kb downstream 5323 true Chr06: 25320875-25326197 Phaseolus vulgaris
Phvul.006G147900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25325198-25326197 Phaseolus vulgaris
Phvul.006G147900 2.0kb upstream 2.0kb upstream 6323 true Chr06: 25318875-25325197 Phaseolus vulgaris
Phvul.006G147900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25318875-25320874 Phaseolus vulgaris
Phvul.006G147900 2.0kb downstream 2.0kb downstream 6323 true Chr06: 25320875-25327197 Phaseolus vulgaris
Phvul.006G147900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25325198-25327197 Phaseolus vulgaris
Phvul.006G147900 5.0kb upstream 5.0kb upstream 9323 true Chr06: 25315875-25325197 Phaseolus vulgaris
Phvul.006G147900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25315875-25320874 Phaseolus vulgaris
Phvul.006G147900 5.0kb downstream 5.0kb downstream 9323 true Chr06: 25320875-25330197 Phaseolus vulgaris
Phvul.006G147900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25325198-25330197 Phaseolus vulgaris
Phvul.006G147900 10.0kb upstream 10.0kb upstream 14323 true Chr06: 25310875-25325197 Phaseolus vulgaris
Phvul.006G147900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25310875-25320874 Phaseolus vulgaris
Phvul.006G147900 10.0kb downstream 10.0kb downstream 14323 true Chr06: 25320875-25335197 Phaseolus vulgaris
Phvul.006G147900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25325198-25335197 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122795495 5272 Eudicot View MSA
122312580 5265 Fabidae View MSA
124069001 5270 Rosid View MSA
123750418 5271 Pentapetalae View MSA
122045248 5273 Angiosperm View MSA
121346712 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 170.787 0.0 511.674 High High
cufflinks 51.2831 0.0 135.052 High  
cufflinks 8.87166 0.0 24.1887   Low
cufflinks 17.4902 0.0 45.7521    
cufflinks 80.1578 0.0 218.199 High  
cufflinks 5.2069 0.0 14.9361   Low
cufflinks 16.2572 0.0 42.5433    
cufflinks 50.0669 0.0 131.911 High  
cufflinks 10.8993 0.0 29.3426    
cufflinks 304.49 0.0 1003.52 High High
cufflinks 45.4567 0.0 118.731 High  

0 Strain