Gene : Phvul.006G148300 P. vulgaris v2.1
Defline:  (1 of 3) K13347 - peroxisomal membrane protein 2 (PXMP2, PMP22) Genomic Order:  1478
Name:  ? Phvul.006G148300 Secondary Identifier:  ? PAC:37173951
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G148300 0.5kb upstream 0.5kb upstream 3735 true Chr06: 25342040-25345774 Phaseolus vulgaris
Phvul.006G148300 0.5kb upstream 0.5kb upstream 500 false Chr06: 25345275-25345774 Phaseolus vulgaris
Phvul.006G148300 0.5kb downstream 0.5kb downstream 3735 true Chr06: 25341540-25345274 Phaseolus vulgaris
Phvul.006G148300 0.5kb downstream 0.5kb downstream 500 false Chr06: 25341540-25342039 Phaseolus vulgaris
Phvul.006G148300 1.0kb upstream 1.0kb upstream 4235 true Chr06: 25342040-25346274 Phaseolus vulgaris
Phvul.006G148300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25345275-25346274 Phaseolus vulgaris
Phvul.006G148300 1.0kb downstream 1.0kb downstream 4235 true Chr06: 25341040-25345274 Phaseolus vulgaris
Phvul.006G148300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25341040-25342039 Phaseolus vulgaris
Phvul.006G148300 2.0kb upstream 2.0kb upstream 5235 true Chr06: 25342040-25347274 Phaseolus vulgaris
Phvul.006G148300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25345275-25347274 Phaseolus vulgaris
Phvul.006G148300 2.0kb downstream 2.0kb downstream 5235 true Chr06: 25340040-25345274 Phaseolus vulgaris
Phvul.006G148300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25340040-25342039 Phaseolus vulgaris
Phvul.006G148300 5.0kb upstream 5.0kb upstream 8235 true Chr06: 25342040-25350274 Phaseolus vulgaris
Phvul.006G148300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25345275-25350274 Phaseolus vulgaris
Phvul.006G148300 5.0kb downstream 5.0kb downstream 8235 true Chr06: 25337040-25345274 Phaseolus vulgaris
Phvul.006G148300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25337040-25342039 Phaseolus vulgaris
Phvul.006G148300 10.0kb upstream 10.0kb upstream 13235 true Chr06: 25342040-25355274 Phaseolus vulgaris
Phvul.006G148300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25345275-25355274 Phaseolus vulgaris
Phvul.006G148300 10.0kb downstream 10.0kb downstream 13235 true Chr06: 25332040-25345274 Phaseolus vulgaris
Phvul.006G148300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25332040-25342039 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302900 5265 Fabidae View MSA
124069781 5270 Rosid View MSA
123740059 5271 Pentapetalae View MSA
122795026 5272 Eudicot View MSA
122043631 5273 Angiosperm View MSA
121345972 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.335 0.0 57.2836   High
cufflinks 11.1748 0.0 31.8324    
cufflinks 8.29341 0.0 24.3295   Low
cufflinks 21.8208 0.0 58.9397   High
cufflinks 10.4771 0.0 30.3573    
cufflinks 8.38069 0.0 24.6088   Low
cufflinks 17.6453 0.0 48.372    
cufflinks 16.6704 0.0 45.7253    
cufflinks 18.3787 0.0 50.2121    
cufflinks 8.76645 0.0 25.6624   Low
cufflinks 9.58889 0.0 27.9376    

0 Strain