Gene : Phvul.009G037800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Genomic Order:  376
Name:  ? Phvul.009G037800 Secondary Identifier:  ? PAC:37151452
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G037800 0.5kb upstream 0.5kb upstream 6098 true Chr09: 8052467-8058564 Phaseolus vulgaris
Phvul.009G037800 0.5kb upstream 0.5kb upstream 500 false Chr09: 8052467-8052966 Phaseolus vulgaris
Phvul.009G037800 0.5kb downstream 0.5kb downstream 6098 true Chr09: 8052967-8059064 Phaseolus vulgaris
Phvul.009G037800 0.5kb downstream 0.5kb downstream 500 false Chr09: 8058565-8059064 Phaseolus vulgaris
Phvul.009G037800 1.0kb upstream 1.0kb upstream 6598 true Chr09: 8051967-8058564 Phaseolus vulgaris
Phvul.009G037800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 8051967-8052966 Phaseolus vulgaris
Phvul.009G037800 1.0kb downstream 1.0kb downstream 6598 true Chr09: 8052967-8059564 Phaseolus vulgaris
Phvul.009G037800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 8058565-8059564 Phaseolus vulgaris
Phvul.009G037800 2.0kb upstream 2.0kb upstream 7598 true Chr09: 8050967-8058564 Phaseolus vulgaris
Phvul.009G037800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 8050967-8052966 Phaseolus vulgaris
Phvul.009G037800 2.0kb downstream 2.0kb downstream 7598 true Chr09: 8052967-8060564 Phaseolus vulgaris
Phvul.009G037800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 8058565-8060564 Phaseolus vulgaris
Phvul.009G037800 5.0kb upstream 5.0kb upstream 10598 true Chr09: 8047967-8058564 Phaseolus vulgaris
Phvul.009G037800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 8047967-8052966 Phaseolus vulgaris
Phvul.009G037800 5.0kb downstream 5.0kb downstream 10598 true Chr09: 8052967-8063564 Phaseolus vulgaris
Phvul.009G037800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 8058565-8063564 Phaseolus vulgaris
Phvul.009G037800 10.0kb upstream 10.0kb upstream 15598 true Chr09: 8042967-8058564 Phaseolus vulgaris
Phvul.009G037800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 8042967-8052966 Phaseolus vulgaris
Phvul.009G037800 10.0kb downstream 10.0kb downstream 15598 true Chr09: 8052967-8068564 Phaseolus vulgaris
Phvul.009G037800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 8058565-8068564 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299885 5265 Fabidae View MSA
124073004 5270 Rosid View MSA
123738437 5271 Pentapetalae View MSA
122790242 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.4979 0.0 139.013 High High
cufflinks 34.9812 0.0 104.13 High  
cufflinks 36.4789 0.0 106.41    
cufflinks 40.9334 0.0 122.328 High  
cufflinks 42.7465 0.0 127.35 High  
cufflinks 30.5176 0.0 89.3466   Low
cufflinks 37.9058 0.0 112.682 High  
cufflinks 25.8952 0.0 75.823   Low
cufflinks 42.5889 0.0 127.298 High  
cufflinks 37.6195 0.0 109.686 High  
cufflinks 48.2192 0.0 142.676 High High

0 Strain