Gene : Phvul.006G146700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31042:SF2 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  1462
Name:  ? Phvul.006G146700 Secondary Identifier:  ? PAC:37172555
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G146700 0.5kb upstream 0.5kb upstream 6876 true Chr06: 25246027-25252902 Phaseolus vulgaris
Phvul.006G146700 0.5kb upstream 0.5kb upstream 500 false Chr06: 25246027-25246526 Phaseolus vulgaris
Phvul.006G146700 0.5kb downstream 0.5kb downstream 6876 true Chr06: 25246527-25253402 Phaseolus vulgaris
Phvul.006G146700 0.5kb downstream 0.5kb downstream 500 false Chr06: 25252903-25253402 Phaseolus vulgaris
Phvul.006G146700 1.0kb upstream 1.0kb upstream 7376 true Chr06: 25245527-25252902 Phaseolus vulgaris
Phvul.006G146700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 25245527-25246526 Phaseolus vulgaris
Phvul.006G146700 1.0kb downstream 1.0kb downstream 7376 true Chr06: 25246527-25253902 Phaseolus vulgaris
Phvul.006G146700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 25252903-25253902 Phaseolus vulgaris
Phvul.006G146700 2.0kb upstream 2.0kb upstream 8376 true Chr06: 25244527-25252902 Phaseolus vulgaris
Phvul.006G146700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 25244527-25246526 Phaseolus vulgaris
Phvul.006G146700 2.0kb downstream 2.0kb downstream 8376 true Chr06: 25246527-25254902 Phaseolus vulgaris
Phvul.006G146700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 25252903-25254902 Phaseolus vulgaris
Phvul.006G146700 5.0kb upstream 5.0kb upstream 11376 true Chr06: 25241527-25252902 Phaseolus vulgaris
Phvul.006G146700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 25241527-25246526 Phaseolus vulgaris
Phvul.006G146700 5.0kb downstream 5.0kb downstream 11376 true Chr06: 25246527-25257902 Phaseolus vulgaris
Phvul.006G146700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 25252903-25257902 Phaseolus vulgaris
Phvul.006G146700 10.0kb upstream 10.0kb upstream 16376 true Chr06: 25236527-25252902 Phaseolus vulgaris
Phvul.006G146700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 25236527-25246526 Phaseolus vulgaris
Phvul.006G146700 10.0kb downstream 10.0kb downstream 16376 true Chr06: 25246527-25262902 Phaseolus vulgaris
Phvul.006G146700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 25252903-25262902 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299648 5265 Fabidae View MSA
124066667 5270 Rosid View MSA
123753722 5271 Pentapetalae View MSA
122788010 5272 Eudicot View MSA
122051448 5273 Angiosperm View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.09185 0.0 17.1334   High
cufflinks 3.52338 0.0 10.5055    
cufflinks 2.4594 0.0 7.63494    
cufflinks 3.72041 0.0 11.0678    
cufflinks 2.63754 0.0 8.1876    
cufflinks 2.14935 0.0 6.78069   Low
cufflinks 3.23194 0.0 9.70975    
cufflinks 3.71179 0.0 10.9431    
cufflinks 3.44386 0.0 10.3023    
cufflinks 7.49581 0.0 20.6896   High
cufflinks 2.9821 0.0 9.09537    

0 Strain