Gene : Phvul.009G026200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31384:SF19 - AUXIN RESPONSE FACTOR 17 Genomic Order:  259
Name:  ? Phvul.009G026200 Secondary Identifier:  ? PAC:37151925
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G026200 0.5kb upstream 0.5kb upstream 4341 true Chr09: 6255190-6259530 Phaseolus vulgaris
Phvul.009G026200 0.5kb upstream 0.5kb upstream 500 false Chr09: 6255190-6255689 Phaseolus vulgaris
Phvul.009G026200 0.5kb downstream 0.5kb downstream 4341 true Chr09: 6255690-6260030 Phaseolus vulgaris
Phvul.009G026200 0.5kb downstream 0.5kb downstream 500 false Chr09: 6259531-6260030 Phaseolus vulgaris
Phvul.009G026200 1.0kb upstream 1.0kb upstream 4841 true Chr09: 6254690-6259530 Phaseolus vulgaris
Phvul.009G026200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6254690-6255689 Phaseolus vulgaris
Phvul.009G026200 1.0kb downstream 1.0kb downstream 4841 true Chr09: 6255690-6260530 Phaseolus vulgaris
Phvul.009G026200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6259531-6260530 Phaseolus vulgaris
Phvul.009G026200 2.0kb upstream 2.0kb upstream 5841 true Chr09: 6253690-6259530 Phaseolus vulgaris
Phvul.009G026200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6253690-6255689 Phaseolus vulgaris
Phvul.009G026200 2.0kb downstream 2.0kb downstream 5841 true Chr09: 6255690-6261530 Phaseolus vulgaris
Phvul.009G026200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6259531-6261530 Phaseolus vulgaris
Phvul.009G026200 5.0kb upstream 5.0kb upstream 8841 true Chr09: 6250690-6259530 Phaseolus vulgaris
Phvul.009G026200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6250690-6255689 Phaseolus vulgaris
Phvul.009G026200 5.0kb downstream 5.0kb downstream 8841 true Chr09: 6255690-6264530 Phaseolus vulgaris
Phvul.009G026200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6259531-6264530 Phaseolus vulgaris
Phvul.009G026200 10.0kb upstream 10.0kb upstream 13841 true Chr09: 6245690-6259530 Phaseolus vulgaris
Phvul.009G026200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6245690-6255689 Phaseolus vulgaris
Phvul.009G026200 10.0kb downstream 10.0kb downstream 13841 true Chr09: 6255690-6269530 Phaseolus vulgaris
Phvul.009G026200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6259531-6269530 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309839 5265 Fabidae View MSA
124065816 5270 Rosid View MSA
123744136 5271 Pentapetalae View MSA
122770913 5272 Eudicot View MSA
122051947 5273 Angiosperm View MSA
121312823 5274 Embryophyte View MSA
123349961 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.01897 0.0 3.34664    
cufflinks 1.19254 0.0 3.85299    
cufflinks 2.4181 0.0 7.22179    
cufflinks 0.629702 0.0 2.18389   Low
cufflinks 3.70504 0.0 10.4955   High
cufflinks 1.64639 0.0 5.13204    
cufflinks 1.90304 0.0 5.77527    
cufflinks 1.55184 0.0 4.85879    
cufflinks 1.14041 0.0 3.68404    
cufflinks 5.56863 0.0 15.261   High
cufflinks 2.82183 0.0 8.22152    

0 Strain