Gene : Phvul.009G026700 P. vulgaris v2.1
Defline:  (1 of 1) 6.3.2.5 - Phosphopantothenate--cysteine ligase / Phosphopantothenoylcysteine synthetase Genomic Order:  265
Name:  ? Phvul.009G026700 Secondary Identifier:  ? PAC:37150829
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris COA-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G026700 0.5kb upstream 0.5kb upstream 4591 true Chr09: 6308157-6312747 Phaseolus vulgaris
Phvul.009G026700 0.5kb upstream 0.5kb upstream 500 false Chr09: 6308157-6308656 Phaseolus vulgaris
Phvul.009G026700 0.5kb downstream 0.5kb downstream 4591 true Chr09: 6308657-6313247 Phaseolus vulgaris
Phvul.009G026700 0.5kb downstream 0.5kb downstream 500 false Chr09: 6312748-6313247 Phaseolus vulgaris
Phvul.009G026700 1.0kb upstream 1.0kb upstream 5091 true Chr09: 6307657-6312747 Phaseolus vulgaris
Phvul.009G026700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6307657-6308656 Phaseolus vulgaris
Phvul.009G026700 1.0kb downstream 1.0kb downstream 5091 true Chr09: 6308657-6313747 Phaseolus vulgaris
Phvul.009G026700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6312748-6313747 Phaseolus vulgaris
Phvul.009G026700 2.0kb upstream 2.0kb upstream 6091 true Chr09: 6306657-6312747 Phaseolus vulgaris
Phvul.009G026700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6306657-6308656 Phaseolus vulgaris
Phvul.009G026700 2.0kb downstream 2.0kb downstream 6091 true Chr09: 6308657-6314747 Phaseolus vulgaris
Phvul.009G026700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6312748-6314747 Phaseolus vulgaris
Phvul.009G026700 5.0kb upstream 5.0kb upstream 9091 true Chr09: 6303657-6312747 Phaseolus vulgaris
Phvul.009G026700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6303657-6308656 Phaseolus vulgaris
Phvul.009G026700 5.0kb downstream 5.0kb downstream 9091 true Chr09: 6308657-6317747 Phaseolus vulgaris
Phvul.009G026700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6312748-6317747 Phaseolus vulgaris
Phvul.009G026700 10.0kb upstream 10.0kb upstream 14091 true Chr09: 6298657-6312747 Phaseolus vulgaris
Phvul.009G026700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6298657-6308656 Phaseolus vulgaris
Phvul.009G026700 10.0kb downstream 10.0kb downstream 14091 true Chr09: 6308657-6322747 Phaseolus vulgaris
Phvul.009G026700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6312748-6322747 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305468 5265 Fabidae View MSA
124065288 5270 Rosid View MSA
123750270 5271 Pentapetalae View MSA
122791769 5272 Eudicot View MSA
122051236 5273 Angiosperm View MSA
121346014 5274 Embryophyte View MSA
123425902 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.25778 0.0 25.5745    
cufflinks 6.28965 0.0 18.0149    
cufflinks 10.3486 0.0 28.281    
cufflinks 15.3841 0.0 40.956   High
cufflinks 7.87382 0.0 22.192    
cufflinks 11.5109 0.0 31.2173    
cufflinks 4.02787 0.0 12.119   Low
cufflinks 2.62594 0.0 8.27324   Low
cufflinks 3.62943 0.0 11.0788   Low
cufflinks 10.8505 0.0 29.5982    
cufflinks 10.823 0.0 29.605    

0 Strain