Gene : Phvul.006G132200 P. vulgaris v2.1
Defline:  (1 of 4) PTHR12758:SF20 - PEPTIDASE-C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  1317
Name:  ? Phvul.006G132200 Secondary Identifier:  ? PAC:37174050
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G132200 0.5kb upstream 0.5kb upstream 7704 true Chr06: 24061756-24069459 Phaseolus vulgaris
Phvul.006G132200 0.5kb upstream 0.5kb upstream 500 false Chr06: 24061756-24062255 Phaseolus vulgaris
Phvul.006G132200 0.5kb downstream 0.5kb downstream 7704 true Chr06: 24062256-24069959 Phaseolus vulgaris
Phvul.006G132200 0.5kb downstream 0.5kb downstream 500 false Chr06: 24069460-24069959 Phaseolus vulgaris
Phvul.006G132200 1.0kb upstream 1.0kb upstream 8204 true Chr06: 24061256-24069459 Phaseolus vulgaris
Phvul.006G132200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24061256-24062255 Phaseolus vulgaris
Phvul.006G132200 1.0kb downstream 1.0kb downstream 8204 true Chr06: 24062256-24070459 Phaseolus vulgaris
Phvul.006G132200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24069460-24070459 Phaseolus vulgaris
Phvul.006G132200 2.0kb upstream 2.0kb upstream 9204 true Chr06: 24060256-24069459 Phaseolus vulgaris
Phvul.006G132200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24060256-24062255 Phaseolus vulgaris
Phvul.006G132200 2.0kb downstream 2.0kb downstream 9204 true Chr06: 24062256-24071459 Phaseolus vulgaris
Phvul.006G132200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24069460-24071459 Phaseolus vulgaris
Phvul.006G132200 5.0kb upstream 5.0kb upstream 12204 true Chr06: 24057256-24069459 Phaseolus vulgaris
Phvul.006G132200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24057256-24062255 Phaseolus vulgaris
Phvul.006G132200 5.0kb downstream 5.0kb downstream 12204 true Chr06: 24062256-24074459 Phaseolus vulgaris
Phvul.006G132200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24069460-24074459 Phaseolus vulgaris
Phvul.006G132200 10.0kb upstream 10.0kb upstream 17204 true Chr06: 24052256-24069459 Phaseolus vulgaris
Phvul.006G132200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24052256-24062255 Phaseolus vulgaris
Phvul.006G132200 10.0kb downstream 10.0kb downstream 17204 true Chr06: 24062256-24079459 Phaseolus vulgaris
Phvul.006G132200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24069460-24079459 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253846 5265 Fabidae View MSA
124065428 5270 Rosid View MSA
123746895 5271 Pentapetalae View MSA
122790736 5272 Eudicot View MSA
122047754 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.52415 0.0 22.2055   Low
cufflinks 17.2343 0.0 44.7307    
cufflinks 18.641 0.0 48.4853    
cufflinks 9.88656 0.0 25.6453   Low
cufflinks 19.6578 0.0 51.1532    
cufflinks 18.154 0.0 47.1851    
cufflinks 17.9525 0.0 46.7132    
cufflinks 16.5784 0.0 43.0342    
cufflinks 22.8906 0.0 60.2277   High
cufflinks 18.0862 0.0 47.0085    
cufflinks 16.6141 0.0 43.0546    

0 Strain