Gene : Phvul.009G026300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21237:SF4 - GRPE PROTEIN HOMOLOG Genomic Order:  260
Name:  ? Phvul.009G026300 Secondary Identifier:  ? PAC:37150787
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G026300 0.5kb upstream 0.5kb upstream 5601 true Chr09: 6260736-6266336 Phaseolus vulgaris
Phvul.009G026300 0.5kb upstream 0.5kb upstream 500 false Chr09: 6260736-6261235 Phaseolus vulgaris
Phvul.009G026300 0.5kb downstream 0.5kb downstream 5601 true Chr09: 6261236-6266836 Phaseolus vulgaris
Phvul.009G026300 0.5kb downstream 0.5kb downstream 500 false Chr09: 6266337-6266836 Phaseolus vulgaris
Phvul.009G026300 1.0kb upstream 1.0kb upstream 6101 true Chr09: 6260236-6266336 Phaseolus vulgaris
Phvul.009G026300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6260236-6261235 Phaseolus vulgaris
Phvul.009G026300 1.0kb downstream 1.0kb downstream 6101 true Chr09: 6261236-6267336 Phaseolus vulgaris
Phvul.009G026300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6266337-6267336 Phaseolus vulgaris
Phvul.009G026300 2.0kb upstream 2.0kb upstream 7101 true Chr09: 6259236-6266336 Phaseolus vulgaris
Phvul.009G026300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6259236-6261235 Phaseolus vulgaris
Phvul.009G026300 2.0kb downstream 2.0kb downstream 7101 true Chr09: 6261236-6268336 Phaseolus vulgaris
Phvul.009G026300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6266337-6268336 Phaseolus vulgaris
Phvul.009G026300 5.0kb upstream 5.0kb upstream 10101 true Chr09: 6256236-6266336 Phaseolus vulgaris
Phvul.009G026300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6256236-6261235 Phaseolus vulgaris
Phvul.009G026300 5.0kb downstream 5.0kb downstream 10101 true Chr09: 6261236-6271336 Phaseolus vulgaris
Phvul.009G026300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6266337-6271336 Phaseolus vulgaris
Phvul.009G026300 10.0kb upstream 10.0kb upstream 15101 true Chr09: 6251236-6266336 Phaseolus vulgaris
Phvul.009G026300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6251236-6261235 Phaseolus vulgaris
Phvul.009G026300 10.0kb downstream 10.0kb downstream 15101 true Chr09: 6261236-6276336 Phaseolus vulgaris
Phvul.009G026300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6266337-6276336 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309592 5265 Fabidae View MSA
124068578 5270 Rosid View MSA
123741631 5271 Pentapetalae View MSA
122792081 5272 Eudicot View MSA
122048667 5273 Angiosperm View MSA
121346760 5274 Embryophyte View MSA
123427154 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.47551 0.0 18.6331   High
cufflinks 5.00918 0.0 14.8849    
cufflinks 9.21944 0.0 25.6042   High
cufflinks 5.34741 0.0 15.8731    
cufflinks 1.83038 0.0 6.16381   Low
cufflinks 4.18947 0.0 12.6872    
cufflinks 1.8934 0.0 6.29057   Low
cufflinks 4.24355 0.0 12.7445    
cufflinks 1.57448 0.0 5.35585   Low
cufflinks 2.94977 0.0 9.32768    
cufflinks 2.50102 0.0 8.11274    

0 Strain