Gene : Phvul.009G024100 P. vulgaris v2.1
Defline:  (1 of 2) K17267 - coatomer protein complex, subunit gamma (COPG) Genomic Order:  239
Name:  ? Phvul.009G024100 Secondary Identifier:  ? PAC:37149123
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G024100 0.5kb upstream 0.5kb upstream 7313 true Chr09: 5877212-5884524 Phaseolus vulgaris
Phvul.009G024100 0.5kb upstream 0.5kb upstream 500 false Chr09: 5884025-5884524 Phaseolus vulgaris
Phvul.009G024100 0.5kb downstream 0.5kb downstream 7313 true Chr09: 5876712-5884024 Phaseolus vulgaris
Phvul.009G024100 0.5kb downstream 0.5kb downstream 500 false Chr09: 5876712-5877211 Phaseolus vulgaris
Phvul.009G024100 1.0kb upstream 1.0kb upstream 7813 true Chr09: 5877212-5885024 Phaseolus vulgaris
Phvul.009G024100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5884025-5885024 Phaseolus vulgaris
Phvul.009G024100 1.0kb downstream 1.0kb downstream 7813 true Chr09: 5876212-5884024 Phaseolus vulgaris
Phvul.009G024100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5876212-5877211 Phaseolus vulgaris
Phvul.009G024100 2.0kb upstream 2.0kb upstream 8813 true Chr09: 5877212-5886024 Phaseolus vulgaris
Phvul.009G024100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5884025-5886024 Phaseolus vulgaris
Phvul.009G024100 2.0kb downstream 2.0kb downstream 8813 true Chr09: 5875212-5884024 Phaseolus vulgaris
Phvul.009G024100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5875212-5877211 Phaseolus vulgaris
Phvul.009G024100 5.0kb upstream 5.0kb upstream 11813 true Chr09: 5877212-5889024 Phaseolus vulgaris
Phvul.009G024100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5884025-5889024 Phaseolus vulgaris
Phvul.009G024100 5.0kb downstream 5.0kb downstream 11813 true Chr09: 5872212-5884024 Phaseolus vulgaris
Phvul.009G024100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5872212-5877211 Phaseolus vulgaris
Phvul.009G024100 10.0kb upstream 10.0kb upstream 16813 true Chr09: 5877212-5894024 Phaseolus vulgaris
Phvul.009G024100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5884025-5894024 Phaseolus vulgaris
Phvul.009G024100 10.0kb downstream 10.0kb downstream 16813 true Chr09: 5867212-5884024 Phaseolus vulgaris
Phvul.009G024100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5867212-5877211 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313608 5265 Fabidae View MSA
124064996 5270 Rosid View MSA
123745715 5271 Pentapetalae View MSA
122789783 5272 Eudicot View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.4629 0.0 45.2582   Low
cufflinks 33.3533 0.0 89.3246 High  
cufflinks 36.8984 0.0 99.9526    
cufflinks 34.7756 0.0 92.87 High  
cufflinks 36.5059 0.0 97.9728 High  
cufflinks 37.3248 0.0 100.925 High  
cufflinks 37.2948 0.0 100.733 High  
cufflinks 30.8378 0.0 82.2782 High  
cufflinks 50.0801 0.0 138.795 High High
cufflinks 29.4866 0.0 78.1804    
cufflinks 36.9148 0.0 99.2536 High  

0 Strain