Gene : Phvul.009G025400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21717//PTHR21717:SF22 - TELOMERIC REPEAT BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  251
Name:  ? Phvul.009G025400 Secondary Identifier:  ? PAC:37150055
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G025400 0.5kb upstream 0.5kb upstream 2833 true Chr09: 6152357-6155189 Phaseolus vulgaris
Phvul.009G025400 0.5kb upstream 0.5kb upstream 500 false Chr09: 6152357-6152856 Phaseolus vulgaris
Phvul.009G025400 0.5kb downstream 0.5kb downstream 2833 true Chr09: 6152857-6155689 Phaseolus vulgaris
Phvul.009G025400 0.5kb downstream 0.5kb downstream 500 false Chr09: 6155190-6155689 Phaseolus vulgaris
Phvul.009G025400 1.0kb upstream 1.0kb upstream 3333 true Chr09: 6151857-6155189 Phaseolus vulgaris
Phvul.009G025400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6151857-6152856 Phaseolus vulgaris
Phvul.009G025400 1.0kb downstream 1.0kb downstream 3333 true Chr09: 6152857-6156189 Phaseolus vulgaris
Phvul.009G025400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6155190-6156189 Phaseolus vulgaris
Phvul.009G025400 2.0kb upstream 2.0kb upstream 4333 true Chr09: 6150857-6155189 Phaseolus vulgaris
Phvul.009G025400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6150857-6152856 Phaseolus vulgaris
Phvul.009G025400 2.0kb downstream 2.0kb downstream 4333 true Chr09: 6152857-6157189 Phaseolus vulgaris
Phvul.009G025400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6155190-6157189 Phaseolus vulgaris
Phvul.009G025400 5.0kb upstream 5.0kb upstream 7333 true Chr09: 6147857-6155189 Phaseolus vulgaris
Phvul.009G025400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6147857-6152856 Phaseolus vulgaris
Phvul.009G025400 5.0kb downstream 5.0kb downstream 7333 true Chr09: 6152857-6160189 Phaseolus vulgaris
Phvul.009G025400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6155190-6160189 Phaseolus vulgaris
Phvul.009G025400 10.0kb upstream 10.0kb upstream 12333 true Chr09: 6142857-6155189 Phaseolus vulgaris
Phvul.009G025400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6142857-6152856 Phaseolus vulgaris
Phvul.009G025400 10.0kb downstream 10.0kb downstream 12333 true Chr09: 6152857-6165189 Phaseolus vulgaris
Phvul.009G025400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6155190-6165189 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296429 5265 Fabidae View MSA
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.43358 0.0 10.2607    
cufflinks 3.4336 0.0 10.2557    
cufflinks 5.10656 0.0 14.6343    
cufflinks 2.97747 0.0 9.06795   Low
cufflinks 4.90969 0.0 14.145    
cufflinks 4.04478 0.0 11.8454    
cufflinks 5.56237 0.0 15.6846   High
cufflinks 4.23776 0.0 12.3122    
cufflinks 5.07466 0.0 14.475    
cufflinks 6.70311 0.0 18.6932   High
cufflinks 3.50601 0.0 10.4492    

0 Strain