Gene : Phvul.009G029000 P. vulgaris v2.1
Defline:  (1 of 3) K01834 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM, gpmA) Genomic Order:  288
Name:  ? Phvul.009G029000 Secondary Identifier:  ? PAC:37150185
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ANAEROFRUCAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris ANAGLYCOLYSIS-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G029000 0.5kb upstream 0.5kb upstream 4521 true Chr09: 6698127-6702647 Phaseolus vulgaris
Phvul.009G029000 0.5kb upstream 0.5kb upstream 500 false Chr09: 6698127-6698626 Phaseolus vulgaris
Phvul.009G029000 0.5kb downstream 0.5kb downstream 4521 true Chr09: 6698627-6703147 Phaseolus vulgaris
Phvul.009G029000 0.5kb downstream 0.5kb downstream 500 false Chr09: 6702648-6703147 Phaseolus vulgaris
Phvul.009G029000 1.0kb upstream 1.0kb upstream 5021 true Chr09: 6697627-6702647 Phaseolus vulgaris
Phvul.009G029000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6697627-6698626 Phaseolus vulgaris
Phvul.009G029000 1.0kb downstream 1.0kb downstream 5021 true Chr09: 6698627-6703647 Phaseolus vulgaris
Phvul.009G029000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6702648-6703647 Phaseolus vulgaris
Phvul.009G029000 2.0kb upstream 2.0kb upstream 6021 true Chr09: 6696627-6702647 Phaseolus vulgaris
Phvul.009G029000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6696627-6698626 Phaseolus vulgaris
Phvul.009G029000 2.0kb downstream 2.0kb downstream 6021 true Chr09: 6698627-6704647 Phaseolus vulgaris
Phvul.009G029000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6702648-6704647 Phaseolus vulgaris
Phvul.009G029000 5.0kb upstream 5.0kb upstream 9021 true Chr09: 6693627-6702647 Phaseolus vulgaris
Phvul.009G029000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6693627-6698626 Phaseolus vulgaris
Phvul.009G029000 5.0kb downstream 5.0kb downstream 9021 true Chr09: 6698627-6707647 Phaseolus vulgaris
Phvul.009G029000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6702648-6707647 Phaseolus vulgaris
Phvul.009G029000 10.0kb upstream 10.0kb upstream 14021 true Chr09: 6688627-6702647 Phaseolus vulgaris
Phvul.009G029000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6688627-6698626 Phaseolus vulgaris
Phvul.009G029000 10.0kb downstream 10.0kb downstream 14021 true Chr09: 6698627-6712647 Phaseolus vulgaris
Phvul.009G029000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6702648-6712647 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306738 5265 Fabidae View MSA
124065528 5270 Rosid View MSA
123752797 5271 Pentapetalae View MSA
122793128 5272 Eudicot View MSA
122042134 5273 Angiosperm View MSA
121349250 5274 Embryophyte View MSA
123428363 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.72767 0.0 20.8465    
cufflinks 3.50095 0.0 14.4386    
cufflinks 1.29511 0.0 6.879   Low
cufflinks 13.7145 0.0 42.9812   High
cufflinks 1.59789 0.0 8.5739   Low
cufflinks 2.34772 0.0 10.7832    
cufflinks 11.6047 0.0 41.8649   High
cufflinks 14.1256 0.0 41.9631   High
cufflinks 9.13316 0.0 31.7104    
cufflinks 2.13161 0.0 10.0377    
cufflinks 3.25351 0.0 13.9291    

0 Strain