Gene : Phvul.009G027400 P. vulgaris v2.1
Defline:  (1 of 11) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  272
Name:  ? Phvul.009G027400 Secondary Identifier:  ? PAC:37149772
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G027400 0.5kb upstream 0.5kb upstream 1472 true Chr09: 6384477-6385948 Phaseolus vulgaris
Phvul.009G027400 0.5kb upstream 0.5kb upstream 500 false Chr09: 6385449-6385948 Phaseolus vulgaris
Phvul.009G027400 0.5kb downstream 0.5kb downstream 1472 true Chr09: 6383977-6385448 Phaseolus vulgaris
Phvul.009G027400 0.5kb downstream 0.5kb downstream 500 false Chr09: 6383977-6384476 Phaseolus vulgaris
Phvul.009G027400 1.0kb upstream 1.0kb upstream 1972 true Chr09: 6384477-6386448 Phaseolus vulgaris
Phvul.009G027400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6385449-6386448 Phaseolus vulgaris
Phvul.009G027400 1.0kb downstream 1.0kb downstream 1972 true Chr09: 6383477-6385448 Phaseolus vulgaris
Phvul.009G027400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6383477-6384476 Phaseolus vulgaris
Phvul.009G027400 2.0kb upstream 2.0kb upstream 2972 true Chr09: 6384477-6387448 Phaseolus vulgaris
Phvul.009G027400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6385449-6387448 Phaseolus vulgaris
Phvul.009G027400 2.0kb downstream 2.0kb downstream 2972 true Chr09: 6382477-6385448 Phaseolus vulgaris
Phvul.009G027400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6382477-6384476 Phaseolus vulgaris
Phvul.009G027400 5.0kb upstream 5.0kb upstream 5972 true Chr09: 6384477-6390448 Phaseolus vulgaris
Phvul.009G027400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6385449-6390448 Phaseolus vulgaris
Phvul.009G027400 5.0kb downstream 5.0kb downstream 5972 true Chr09: 6379477-6385448 Phaseolus vulgaris
Phvul.009G027400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6379477-6384476 Phaseolus vulgaris
Phvul.009G027400 10.0kb upstream 10.0kb upstream 10972 true Chr09: 6384477-6395448 Phaseolus vulgaris
Phvul.009G027400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6385449-6395448 Phaseolus vulgaris
Phvul.009G027400 10.0kb downstream 10.0kb downstream 10972 true Chr09: 6374477-6385448 Phaseolus vulgaris
Phvul.009G027400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6374477-6384476 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314744 5265 Fabidae View MSA
124069382 5270 Rosid View MSA
123752468 5271 Pentapetalae View MSA
122797002 5272 Eudicot View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0767279 0.0 0.339164 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0480248 0.0 0.223082 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.104315 0.0 0.447164 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0275279 0.0 0.135878 Low  
cufflinks 0.0252422 0.0 0.125228 Low Low

0 Strain