Gene : Phvul.009G031300 P. vulgaris v2.1
Defline:  (1 of 2) K12118 - cryptochrome 1 (CRY1) Genomic Order:  311
Name:  ? Phvul.009G031300 Secondary Identifier:  ? PAC:37148549
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G031300 0.5kb upstream 0.5kb upstream 9783 true Chr09: 7169892-7179674 Phaseolus vulgaris
Phvul.009G031300 0.5kb upstream 0.5kb upstream 500 false Chr09: 7169892-7170391 Phaseolus vulgaris
Phvul.009G031300 0.5kb downstream 0.5kb downstream 9783 true Chr09: 7170392-7180174 Phaseolus vulgaris
Phvul.009G031300 0.5kb downstream 0.5kb downstream 500 false Chr09: 7179675-7180174 Phaseolus vulgaris
Phvul.009G031300 1.0kb upstream 1.0kb upstream 10283 true Chr09: 7169392-7179674 Phaseolus vulgaris
Phvul.009G031300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7169392-7170391 Phaseolus vulgaris
Phvul.009G031300 1.0kb downstream 1.0kb downstream 10283 true Chr09: 7170392-7180674 Phaseolus vulgaris
Phvul.009G031300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7179675-7180674 Phaseolus vulgaris
Phvul.009G031300 2.0kb upstream 2.0kb upstream 11283 true Chr09: 7168392-7179674 Phaseolus vulgaris
Phvul.009G031300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7168392-7170391 Phaseolus vulgaris
Phvul.009G031300 2.0kb downstream 2.0kb downstream 11283 true Chr09: 7170392-7181674 Phaseolus vulgaris
Phvul.009G031300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7179675-7181674 Phaseolus vulgaris
Phvul.009G031300 5.0kb upstream 5.0kb upstream 14283 true Chr09: 7165392-7179674 Phaseolus vulgaris
Phvul.009G031300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7165392-7170391 Phaseolus vulgaris
Phvul.009G031300 5.0kb downstream 5.0kb downstream 14283 true Chr09: 7170392-7184674 Phaseolus vulgaris
Phvul.009G031300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7179675-7184674 Phaseolus vulgaris
Phvul.009G031300 10.0kb upstream 10.0kb upstream 19283 true Chr09: 7160392-7179674 Phaseolus vulgaris
Phvul.009G031300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7160392-7170391 Phaseolus vulgaris
Phvul.009G031300 10.0kb downstream 10.0kb downstream 19283 true Chr09: 7170392-7189674 Phaseolus vulgaris
Phvul.009G031300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7179675-7189674 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314673 5265 Fabidae View MSA
124068248 5270 Rosid View MSA
123736970 5271 Pentapetalae View MSA
122788964 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8828 0.0 41.9177    
cufflinks 26.5148 0.0 116.03    
cufflinks 33.4269 0.0 191.327    
cufflinks 6.69424 0.0 25.9683    
cufflinks 28.8775 0.0 125.67    
cufflinks 20.9851 0.0 75.1403    
cufflinks 0.895699 0.0 4.43267   Low
cufflinks 0.875572 0.0 4.1519   Low
cufflinks 0.657037 0.0 3.7045   Low
cufflinks 31.2742 0.0 146.303    
cufflinks 21.5419 0.0 76.5341    

0 Strain