Gene : Phvul.009G030900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR14791 - BOMB/KIRA PROTEINS Genomic Order:  307
Name:  ? Phvul.009G030900 Secondary Identifier:  ? PAC:37150989
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G030900 0.5kb upstream 0.5kb upstream 1794 true Chr09: 7064213-7066006 Phaseolus vulgaris
Phvul.009G030900 0.5kb upstream 0.5kb upstream 500 false Chr09: 7064213-7064712 Phaseolus vulgaris
Phvul.009G030900 0.5kb downstream 0.5kb downstream 1794 true Chr09: 7064713-7066506 Phaseolus vulgaris
Phvul.009G030900 0.5kb downstream 0.5kb downstream 500 false Chr09: 7066007-7066506 Phaseolus vulgaris
Phvul.009G030900 1.0kb upstream 1.0kb upstream 2294 true Chr09: 7063713-7066006 Phaseolus vulgaris
Phvul.009G030900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7063713-7064712 Phaseolus vulgaris
Phvul.009G030900 1.0kb downstream 1.0kb downstream 2294 true Chr09: 7064713-7067006 Phaseolus vulgaris
Phvul.009G030900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7066007-7067006 Phaseolus vulgaris
Phvul.009G030900 2.0kb upstream 2.0kb upstream 3294 true Chr09: 7062713-7066006 Phaseolus vulgaris
Phvul.009G030900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7062713-7064712 Phaseolus vulgaris
Phvul.009G030900 2.0kb downstream 2.0kb downstream 3294 true Chr09: 7064713-7068006 Phaseolus vulgaris
Phvul.009G030900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7066007-7068006 Phaseolus vulgaris
Phvul.009G030900 5.0kb upstream 5.0kb upstream 6294 true Chr09: 7059713-7066006 Phaseolus vulgaris
Phvul.009G030900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7059713-7064712 Phaseolus vulgaris
Phvul.009G030900 5.0kb downstream 5.0kb downstream 6294 true Chr09: 7064713-7071006 Phaseolus vulgaris
Phvul.009G030900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7066007-7071006 Phaseolus vulgaris
Phvul.009G030900 10.0kb upstream 10.0kb upstream 11294 true Chr09: 7054713-7066006 Phaseolus vulgaris
Phvul.009G030900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7054713-7064712 Phaseolus vulgaris
Phvul.009G030900 10.0kb downstream 10.0kb downstream 11294 true Chr09: 7064713-7076006 Phaseolus vulgaris
Phvul.009G030900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7066007-7076006 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311330 5265 Fabidae View MSA
124072154 5270 Rosid View MSA
123748373 5271 Pentapetalae View MSA
122797765 5272 Eudicot View MSA
122050740 5273 Angiosperm View MSA
121350407 5274 Embryophyte View MSA
123381715 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.4372 0.0 26.9268    
cufflinks 4.76646 0.0 14.7075    
cufflinks 13.8277 0.0 37.9595    
cufflinks 24.0138 0.0 63.5347   High
cufflinks 5.16905 0.0 15.9125    
cufflinks 25.3453 0.0 66.6428   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.4288 0.0 8.10716   Low
cufflinks 11.0088 0.0 31.126    

0 Strain