Gene : Phvul.006G136000 P. vulgaris v2.1
Defline:  (1 of 37) PF03000 - NPH3 family (NPH3) Genomic Order:  1359
Name:  ? Phvul.006G136000 Secondary Identifier:  ? PAC:37173671
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G136000 0.5kb upstream 0.5kb upstream 7552 true Chr06: 24367542-24375093 Phaseolus vulgaris
Phvul.006G136000 0.5kb upstream 0.5kb upstream 500 false Chr06: 24374594-24375093 Phaseolus vulgaris
Phvul.006G136000 0.5kb downstream 0.5kb downstream 7552 true Chr06: 24367042-24374593 Phaseolus vulgaris
Phvul.006G136000 0.5kb downstream 0.5kb downstream 500 false Chr06: 24367042-24367541 Phaseolus vulgaris
Phvul.006G136000 1.0kb upstream 1.0kb upstream 8052 true Chr06: 24367542-24375593 Phaseolus vulgaris
Phvul.006G136000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24374594-24375593 Phaseolus vulgaris
Phvul.006G136000 1.0kb downstream 1.0kb downstream 8052 true Chr06: 24366542-24374593 Phaseolus vulgaris
Phvul.006G136000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24366542-24367541 Phaseolus vulgaris
Phvul.006G136000 2.0kb upstream 2.0kb upstream 9052 true Chr06: 24367542-24376593 Phaseolus vulgaris
Phvul.006G136000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24374594-24376593 Phaseolus vulgaris
Phvul.006G136000 2.0kb downstream 2.0kb downstream 9052 true Chr06: 24365542-24374593 Phaseolus vulgaris
Phvul.006G136000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24365542-24367541 Phaseolus vulgaris
Phvul.006G136000 5.0kb upstream 5.0kb upstream 12052 true Chr06: 24367542-24379593 Phaseolus vulgaris
Phvul.006G136000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24374594-24379593 Phaseolus vulgaris
Phvul.006G136000 5.0kb downstream 5.0kb downstream 12052 true Chr06: 24362542-24374593 Phaseolus vulgaris
Phvul.006G136000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24362542-24367541 Phaseolus vulgaris
Phvul.006G136000 10.0kb upstream 10.0kb upstream 17052 true Chr06: 24367542-24384593 Phaseolus vulgaris
Phvul.006G136000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24374594-24384593 Phaseolus vulgaris
Phvul.006G136000 10.0kb downstream 10.0kb downstream 17052 true Chr06: 24357542-24374593 Phaseolus vulgaris
Phvul.006G136000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24357542-24367541 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026454 5273 Angiosperm View MSA
122313072 5265 Fabidae View MSA
124067148 5270 Rosid View MSA
123737998 5271 Pentapetalae View MSA
122789015 5272 Eudicot View MSA
121296339 5274 Embryophyte View MSA
123334520 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.06605 0.0 3.51145    
cufflinks 1.93526 0.0 5.95769    
cufflinks 1.06033 0.0 3.47474    
cufflinks 0.107166 0.0 0.437333 Low Low
cufflinks 6.59057 0.0 18.0078    
cufflinks 2.16882 0.0 6.58012    
cufflinks 7.84863 0.0 21.0298    
cufflinks 5.92652 0.0 16.1766    
cufflinks 3.69862 0.0 10.607    
cufflinks 0.956392 0.0 3.19236    
cufflinks 15.6553 0.0 40.5731   High

0 Strain