Gene : Phvul.006G134400 P. vulgaris v2.1
Defline:  (1 of 4) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1343
Name:  ? Phvul.006G134400 Secondary Identifier:  ? PAC:37172954
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G134400 0.5kb upstream 0.5kb upstream 5314 true Chr06: 24237616-24242929 Phaseolus vulgaris
Phvul.006G134400 0.5kb upstream 0.5kb upstream 500 false Chr06: 24242430-24242929 Phaseolus vulgaris
Phvul.006G134400 0.5kb downstream 0.5kb downstream 5314 true Chr06: 24237116-24242429 Phaseolus vulgaris
Phvul.006G134400 0.5kb downstream 0.5kb downstream 500 false Chr06: 24237116-24237615 Phaseolus vulgaris
Phvul.006G134400 1.0kb upstream 1.0kb upstream 5814 true Chr06: 24237616-24243429 Phaseolus vulgaris
Phvul.006G134400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24242430-24243429 Phaseolus vulgaris
Phvul.006G134400 1.0kb downstream 1.0kb downstream 5814 true Chr06: 24236616-24242429 Phaseolus vulgaris
Phvul.006G134400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24236616-24237615 Phaseolus vulgaris
Phvul.006G134400 2.0kb upstream 2.0kb upstream 6814 true Chr06: 24237616-24244429 Phaseolus vulgaris
Phvul.006G134400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24242430-24244429 Phaseolus vulgaris
Phvul.006G134400 2.0kb downstream 2.0kb downstream 6814 true Chr06: 24235616-24242429 Phaseolus vulgaris
Phvul.006G134400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24235616-24237615 Phaseolus vulgaris
Phvul.006G134400 5.0kb upstream 5.0kb upstream 9814 true Chr06: 24237616-24247429 Phaseolus vulgaris
Phvul.006G134400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24242430-24247429 Phaseolus vulgaris
Phvul.006G134400 5.0kb downstream 5.0kb downstream 9814 true Chr06: 24232616-24242429 Phaseolus vulgaris
Phvul.006G134400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24232616-24237615 Phaseolus vulgaris
Phvul.006G134400 10.0kb upstream 10.0kb upstream 14814 true Chr06: 24237616-24252429 Phaseolus vulgaris
Phvul.006G134400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24242430-24252429 Phaseolus vulgaris
Phvul.006G134400 10.0kb downstream 10.0kb downstream 14814 true Chr06: 24227616-24242429 Phaseolus vulgaris
Phvul.006G134400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24227616-24237615 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122296360 5265 Fabidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.7514 0.0 58.8082   High
cufflinks 14.6777 0.0 38.3433   Low
cufflinks 18.7909 0.0 48.6609    
cufflinks 14.6995 0.0 38.5172   Low
cufflinks 17.2878 0.0 45.0015    
cufflinks 16.9948 0.0 44.1368    
cufflinks 21.9298 0.0 56.7046    
cufflinks 17.9498 0.0 46.5121    
cufflinks 24.2718 0.0 62.7381   High
cufflinks 19.8127 0.0 51.305    
cufflinks 19.0051 0.0 49.3089    

0 Strain