Gene : Phvul.009G029400 P. vulgaris v2.1
Defline:  (1 of 1) KOG4532 - WD40-like repeat containing protein Genomic Order:  292
Name:  ? Phvul.009G029400 Secondary Identifier:  ? PAC:37151319
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G029400 0.5kb upstream 0.5kb upstream 5365 true Chr09: 6748548-6753912 Phaseolus vulgaris
Phvul.009G029400 0.5kb upstream 0.5kb upstream 500 false Chr09: 6748548-6749047 Phaseolus vulgaris
Phvul.009G029400 0.5kb downstream 0.5kb downstream 5365 true Chr09: 6749048-6754412 Phaseolus vulgaris
Phvul.009G029400 0.5kb downstream 0.5kb downstream 500 false Chr09: 6753913-6754412 Phaseolus vulgaris
Phvul.009G029400 1.0kb upstream 1.0kb upstream 5865 true Chr09: 6748048-6753912 Phaseolus vulgaris
Phvul.009G029400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6748048-6749047 Phaseolus vulgaris
Phvul.009G029400 1.0kb downstream 1.0kb downstream 5865 true Chr09: 6749048-6754912 Phaseolus vulgaris
Phvul.009G029400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6753913-6754912 Phaseolus vulgaris
Phvul.009G029400 2.0kb upstream 2.0kb upstream 6865 true Chr09: 6747048-6753912 Phaseolus vulgaris
Phvul.009G029400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6747048-6749047 Phaseolus vulgaris
Phvul.009G029400 2.0kb downstream 2.0kb downstream 6865 true Chr09: 6749048-6755912 Phaseolus vulgaris
Phvul.009G029400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6753913-6755912 Phaseolus vulgaris
Phvul.009G029400 5.0kb upstream 5.0kb upstream 9865 true Chr09: 6744048-6753912 Phaseolus vulgaris
Phvul.009G029400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6744048-6749047 Phaseolus vulgaris
Phvul.009G029400 5.0kb downstream 5.0kb downstream 9865 true Chr09: 6749048-6758912 Phaseolus vulgaris
Phvul.009G029400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6753913-6758912 Phaseolus vulgaris
Phvul.009G029400 10.0kb upstream 10.0kb upstream 14865 true Chr09: 6739048-6753912 Phaseolus vulgaris
Phvul.009G029400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6739048-6749047 Phaseolus vulgaris
Phvul.009G029400 10.0kb downstream 10.0kb downstream 14865 true Chr09: 6749048-6763912 Phaseolus vulgaris
Phvul.009G029400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6753913-6763912 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299422 5265 Fabidae View MSA
124063136 5270 Rosid View MSA
123741665 5271 Pentapetalae View MSA
122789476 5272 Eudicot View MSA
122045317 5273 Angiosperm View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.831 0.0 43.8209    
cufflinks 13.953 0.0 36.7301    
cufflinks 25.3387 0.0 65.5014    
cufflinks 10.8249 0.0 28.9968    
cufflinks 20.6668 0.0 53.5773    
cufflinks 21.6221 0.0 55.9844    
cufflinks 5.97382 0.0 16.8448   Low
cufflinks 8.0255 0.0 22.0357    
cufflinks 6.07916 0.0 17.1259   Low
cufflinks 112.187 0.0 318.245 High High
cufflinks 15.6841 0.0 41.0763    

0 Strain