Gene : Phvul.009G030100 P. vulgaris v2.1
Defline:  (1 of 39) PF05678 - VQ motif (VQ) Genomic Order:  299
Name:  ? Phvul.009G030100 Secondary Identifier:  ? PAC:37150834
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G030100 0.5kb upstream 0.5kb upstream 2390 true Chr09: 6924110-6926499 Phaseolus vulgaris
Phvul.009G030100 0.5kb upstream 0.5kb upstream 500 false Chr09: 6924110-6924609 Phaseolus vulgaris
Phvul.009G030100 0.5kb downstream 0.5kb downstream 2390 true Chr09: 6924610-6926999 Phaseolus vulgaris
Phvul.009G030100 0.5kb downstream 0.5kb downstream 500 false Chr09: 6926500-6926999 Phaseolus vulgaris
Phvul.009G030100 1.0kb upstream 1.0kb upstream 2890 true Chr09: 6923610-6926499 Phaseolus vulgaris
Phvul.009G030100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6923610-6924609 Phaseolus vulgaris
Phvul.009G030100 1.0kb downstream 1.0kb downstream 2890 true Chr09: 6924610-6927499 Phaseolus vulgaris
Phvul.009G030100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6926500-6927499 Phaseolus vulgaris
Phvul.009G030100 2.0kb upstream 2.0kb upstream 3890 true Chr09: 6922610-6926499 Phaseolus vulgaris
Phvul.009G030100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6922610-6924609 Phaseolus vulgaris
Phvul.009G030100 2.0kb downstream 2.0kb downstream 3890 true Chr09: 6924610-6928499 Phaseolus vulgaris
Phvul.009G030100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6926500-6928499 Phaseolus vulgaris
Phvul.009G030100 5.0kb upstream 5.0kb upstream 6890 true Chr09: 6919610-6926499 Phaseolus vulgaris
Phvul.009G030100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6919610-6924609 Phaseolus vulgaris
Phvul.009G030100 5.0kb downstream 5.0kb downstream 6890 true Chr09: 6924610-6931499 Phaseolus vulgaris
Phvul.009G030100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6926500-6931499 Phaseolus vulgaris
Phvul.009G030100 10.0kb upstream 10.0kb upstream 11890 true Chr09: 6914610-6926499 Phaseolus vulgaris
Phvul.009G030100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6914610-6924609 Phaseolus vulgaris
Phvul.009G030100 10.0kb downstream 10.0kb downstream 11890 true Chr09: 6924610-6936499 Phaseolus vulgaris
Phvul.009G030100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6926500-6936499 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255087 5265 Fabidae View MSA
124069975 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.619952 0.0 2.27917   Low
cufflinks 12.254 0.0 33.0465    
cufflinks 2.12673 0.0 6.85996    
cufflinks 0.798822 0.0 2.85677   Low
cufflinks 23.1305 0.0 60.0559   High
cufflinks 3.26096 0.0 10.0422    
cufflinks 4.88596 0.0 14.3192    
cufflinks 2.94391 0.0 9.16902    
cufflinks 4.04855 0.0 12.1395    
cufflinks 14.7938 0.0 39.3688    
cufflinks 22.0927 0.0 57.4895   High

0 Strain