Gene : Phvul.009G029800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10788:SF25 - TREHALOSE-PHOSPHATE PHOSPHATASE D-RELATED Genomic Order:  296
Name:  ? Phvul.009G029800 Secondary Identifier:  ? PAC:37148835
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G029800 0.5kb upstream 0.5kb upstream 3061 true Chr09: 6838960-6842020 Phaseolus vulgaris
Phvul.009G029800 0.5kb upstream 0.5kb upstream 500 false Chr09: 6841521-6842020 Phaseolus vulgaris
Phvul.009G029800 0.5kb downstream 0.5kb downstream 3061 true Chr09: 6838460-6841520 Phaseolus vulgaris
Phvul.009G029800 0.5kb downstream 0.5kb downstream 500 false Chr09: 6838460-6838959 Phaseolus vulgaris
Phvul.009G029800 1.0kb upstream 1.0kb upstream 3561 true Chr09: 6838960-6842520 Phaseolus vulgaris
Phvul.009G029800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6841521-6842520 Phaseolus vulgaris
Phvul.009G029800 1.0kb downstream 1.0kb downstream 3561 true Chr09: 6837960-6841520 Phaseolus vulgaris
Phvul.009G029800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6837960-6838959 Phaseolus vulgaris
Phvul.009G029800 2.0kb upstream 2.0kb upstream 4561 true Chr09: 6838960-6843520 Phaseolus vulgaris
Phvul.009G029800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6841521-6843520 Phaseolus vulgaris
Phvul.009G029800 2.0kb downstream 2.0kb downstream 4561 true Chr09: 6836960-6841520 Phaseolus vulgaris
Phvul.009G029800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6836960-6838959 Phaseolus vulgaris
Phvul.009G029800 5.0kb upstream 5.0kb upstream 7561 true Chr09: 6838960-6846520 Phaseolus vulgaris
Phvul.009G029800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6841521-6846520 Phaseolus vulgaris
Phvul.009G029800 5.0kb downstream 5.0kb downstream 7561 true Chr09: 6833960-6841520 Phaseolus vulgaris
Phvul.009G029800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6833960-6838959 Phaseolus vulgaris
Phvul.009G029800 10.0kb upstream 10.0kb upstream 12561 true Chr09: 6838960-6851520 Phaseolus vulgaris
Phvul.009G029800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6841521-6851520 Phaseolus vulgaris
Phvul.009G029800 10.0kb downstream 10.0kb downstream 12561 true Chr09: 6828960-6841520 Phaseolus vulgaris
Phvul.009G029800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6828960-6838959 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310219 5265 Fabidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.82041 0.0 16.6375    
cufflinks 1.65299 0.0 5.46462    
cufflinks 2.17805 0.0 6.96925    
cufflinks 1.78869 0.0 5.90178    
cufflinks 15.5129 0.0 41.1009   High
cufflinks 4.13532 0.0 12.293    
cufflinks 19.6423 0.0 51.1408   High
cufflinks 6.24451 0.0 17.6938    
cufflinks 18.3724 0.0 48.0063   High
cufflinks 0.495181 0.0 1.85035   Low
cufflinks 7.32354 0.0 20.609    

0 Strain