Gene : Phvul.006G138300 P. vulgaris v2.1
Defline:  (1 of 4) PTHR23180:SF249 - ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD11-RELATED Genomic Order:  1377
Name:  ? Phvul.006G138300 Secondary Identifier:  ? PAC:37173702
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G138300 0.5kb upstream 0.5kb upstream 3507 true Chr06: 24542652-24546158 Phaseolus vulgaris
Phvul.006G138300 0.5kb upstream 0.5kb upstream 500 false Chr06: 24545659-24546158 Phaseolus vulgaris
Phvul.006G138300 0.5kb downstream 0.5kb downstream 3507 true Chr06: 24542152-24545658 Phaseolus vulgaris
Phvul.006G138300 0.5kb downstream 0.5kb downstream 500 false Chr06: 24542152-24542651 Phaseolus vulgaris
Phvul.006G138300 1.0kb upstream 1.0kb upstream 4007 true Chr06: 24542652-24546658 Phaseolus vulgaris
Phvul.006G138300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24545659-24546658 Phaseolus vulgaris
Phvul.006G138300 1.0kb downstream 1.0kb downstream 4007 true Chr06: 24541652-24545658 Phaseolus vulgaris
Phvul.006G138300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24541652-24542651 Phaseolus vulgaris
Phvul.006G138300 2.0kb upstream 2.0kb upstream 5007 true Chr06: 24542652-24547658 Phaseolus vulgaris
Phvul.006G138300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24545659-24547658 Phaseolus vulgaris
Phvul.006G138300 2.0kb downstream 2.0kb downstream 5007 true Chr06: 24540652-24545658 Phaseolus vulgaris
Phvul.006G138300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24540652-24542651 Phaseolus vulgaris
Phvul.006G138300 5.0kb upstream 5.0kb upstream 8007 true Chr06: 24542652-24550658 Phaseolus vulgaris
Phvul.006G138300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24545659-24550658 Phaseolus vulgaris
Phvul.006G138300 5.0kb downstream 5.0kb downstream 8007 true Chr06: 24537652-24545658 Phaseolus vulgaris
Phvul.006G138300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24537652-24542651 Phaseolus vulgaris
Phvul.006G138300 10.0kb upstream 10.0kb upstream 13007 true Chr06: 24542652-24555658 Phaseolus vulgaris
Phvul.006G138300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24545659-24555658 Phaseolus vulgaris
Phvul.006G138300 10.0kb downstream 10.0kb downstream 13007 true Chr06: 24532652-24545658 Phaseolus vulgaris
Phvul.006G138300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24532652-24542651 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308501 5265 Fabidae View MSA
124063417 5270 Rosid View MSA
123745125 5271 Pentapetalae View MSA
122791295 5272 Eudicot View MSA
122045342 5273 Angiosperm View MSA
121310436 5274 Embryophyte View MSA
123347920 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.00537 0.0 14.8931    
cufflinks 5.0352 0.0 15.0132    
cufflinks 5.47637 0.0 16.051    
cufflinks 8.76148 0.0 24.8345   High
cufflinks 4.70066 0.0 14.2689    
cufflinks 5.72891 0.0 16.8109    
cufflinks 4.74704 0.0 14.2936    
cufflinks 2.94129 0.0 9.25943   Low
cufflinks 3.12284 0.0 9.90163   Low
cufflinks 9.09352 0.0 25.5026   High
cufflinks 5.73026 0.0 16.9774    

0 Strain