Gene : Phvul.006G136800 P. vulgaris v2.1
Defline:  (1 of 16) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  1367
Name:  ? Phvul.006G136800 Secondary Identifier:  ? PAC:37171948
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G136800 0.5kb upstream 0.5kb upstream 3490 true Chr06: 24464897-24468386 Phaseolus vulgaris
Phvul.006G136800 0.5kb upstream 0.5kb upstream 500 false Chr06: 24467887-24468386 Phaseolus vulgaris
Phvul.006G136800 0.5kb downstream 0.5kb downstream 3490 true Chr06: 24464397-24467886 Phaseolus vulgaris
Phvul.006G136800 0.5kb downstream 0.5kb downstream 500 false Chr06: 24464397-24464896 Phaseolus vulgaris
Phvul.006G136800 1.0kb upstream 1.0kb upstream 3990 true Chr06: 24464897-24468886 Phaseolus vulgaris
Phvul.006G136800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 24467887-24468886 Phaseolus vulgaris
Phvul.006G136800 1.0kb downstream 1.0kb downstream 3990 true Chr06: 24463897-24467886 Phaseolus vulgaris
Phvul.006G136800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 24463897-24464896 Phaseolus vulgaris
Phvul.006G136800 2.0kb upstream 2.0kb upstream 4990 true Chr06: 24464897-24469886 Phaseolus vulgaris
Phvul.006G136800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 24467887-24469886 Phaseolus vulgaris
Phvul.006G136800 2.0kb downstream 2.0kb downstream 4990 true Chr06: 24462897-24467886 Phaseolus vulgaris
Phvul.006G136800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 24462897-24464896 Phaseolus vulgaris
Phvul.006G136800 5.0kb upstream 5.0kb upstream 7990 true Chr06: 24464897-24472886 Phaseolus vulgaris
Phvul.006G136800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 24467887-24472886 Phaseolus vulgaris
Phvul.006G136800 5.0kb downstream 5.0kb downstream 7990 true Chr06: 24459897-24467886 Phaseolus vulgaris
Phvul.006G136800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 24459897-24464896 Phaseolus vulgaris
Phvul.006G136800 10.0kb upstream 10.0kb upstream 12990 true Chr06: 24464897-24477886 Phaseolus vulgaris
Phvul.006G136800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 24467887-24477886 Phaseolus vulgaris
Phvul.006G136800 10.0kb downstream 10.0kb downstream 12990 true Chr06: 24454897-24467886 Phaseolus vulgaris
Phvul.006G136800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 24454897-24464896 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780545 5273 Angiosperm View MSA
122301382 5265 Fabidae View MSA
124050263 5270 Rosid View MSA
123746693 5271 Pentapetalae View MSA
122772010 5272 Eudicot View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.04247 0.0 3.4094   High
cufflinks 0.0798187 0.0 0.328772 Low  
cufflinks 0.041628 0.0 0.181435 Low  
cufflinks 0.635664 0.0 2.21354   High
cufflinks 0.0924893 0.0 0.380643 Low  
cufflinks 0.0782912 0.0 0.322905 Low  
cufflinks 0.311655 0.0 1.14679 Low  
cufflinks 0.112625 0.0 0.448677 Low  
cufflinks 0.0411462 0.0 0.178695 Low  
cufflinks 0.0264582 0.0 0.121334 Low Low
cufflinks 0.116063 0.0 0.466253 Low  

0 Strain