Gene : Phvul.009G158101 P. vulgaris v2.1
Defline:  (1 of 4) PTHR33147:SF3 - DEFENSIN-LIKE PROTEIN 6 Genomic Order:  1622
Name:  ? Phvul.009G158101 Secondary Identifier:  ? PAC:37150413
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G158101 0.5kb upstream 0.5kb upstream 1135 true Chr09: 23420493-23421627 Phaseolus vulgaris
Phvul.009G158101 0.5kb upstream 0.5kb upstream 500 false Chr09: 23420493-23420992 Phaseolus vulgaris
Phvul.009G158101 0.5kb downstream 0.5kb downstream 1135 true Chr09: 23420993-23422127 Phaseolus vulgaris
Phvul.009G158101 0.5kb downstream 0.5kb downstream 500 false Chr09: 23421628-23422127 Phaseolus vulgaris
Phvul.009G158101 1.0kb upstream 1.0kb upstream 1635 true Chr09: 23419993-23421627 Phaseolus vulgaris
Phvul.009G158101 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23419993-23420992 Phaseolus vulgaris
Phvul.009G158101 1.0kb downstream 1.0kb downstream 1635 true Chr09: 23420993-23422627 Phaseolus vulgaris
Phvul.009G158101 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23421628-23422627 Phaseolus vulgaris
Phvul.009G158101 2.0kb upstream 2.0kb upstream 2635 true Chr09: 23418993-23421627 Phaseolus vulgaris
Phvul.009G158101 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23418993-23420992 Phaseolus vulgaris
Phvul.009G158101 2.0kb downstream 2.0kb downstream 2635 true Chr09: 23420993-23423627 Phaseolus vulgaris
Phvul.009G158101 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23421628-23423627 Phaseolus vulgaris
Phvul.009G158101 5.0kb upstream 5.0kb upstream 5635 true Chr09: 23415993-23421627 Phaseolus vulgaris
Phvul.009G158101 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23415993-23420992 Phaseolus vulgaris
Phvul.009G158101 5.0kb downstream 5.0kb downstream 5635 true Chr09: 23420993-23426627 Phaseolus vulgaris
Phvul.009G158101 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23421628-23426627 Phaseolus vulgaris
Phvul.009G158101 10.0kb upstream 10.0kb upstream 10635 true Chr09: 23410993-23421627 Phaseolus vulgaris
Phvul.009G158101 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23410993-23420992 Phaseolus vulgaris
Phvul.009G158101 10.0kb downstream 10.0kb downstream 10635 true Chr09: 23420993-23431627 Phaseolus vulgaris
Phvul.009G158101 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23421628-23431627 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029096 5273 Angiosperm View MSA
122296962 5265 Fabidae View MSA
124066423 5270 Rosid View MSA
123752741 5271 Pentapetalae View MSA
122796765 5272 Eudicot View MSA
121298492 5274 Embryophyte View MSA
123336463 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.266606 0.0 1.17849 Low  
cufflinks 0.0828896 0.0 0.414002 Low Low
cufflinks 0.156963 0.0 0.733127 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.77866 0.0 10.0859    
cufflinks 1.5016 0.0 5.74851    
cufflinks 13.5367 0.0 41.3207   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain