Gene : Phvul.009G160600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR17130//PTHR17130:SF25 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 // SUBFAMILY NOT NAMED Genomic Order:  1647
Name:  ? Phvul.009G160600 Secondary Identifier:  ? PAC:37150667
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G160600 0.5kb upstream 0.5kb upstream 1668 true Chr09: 23729691-23731358 Phaseolus vulgaris
Phvul.009G160600 0.5kb upstream 0.5kb upstream 500 false Chr09: 23730859-23731358 Phaseolus vulgaris
Phvul.009G160600 0.5kb downstream 0.5kb downstream 1668 true Chr09: 23729191-23730858 Phaseolus vulgaris
Phvul.009G160600 0.5kb downstream 0.5kb downstream 500 false Chr09: 23729191-23729690 Phaseolus vulgaris
Phvul.009G160600 1.0kb upstream 1.0kb upstream 2168 true Chr09: 23729691-23731858 Phaseolus vulgaris
Phvul.009G160600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23730859-23731858 Phaseolus vulgaris
Phvul.009G160600 1.0kb downstream 1.0kb downstream 2168 true Chr09: 23728691-23730858 Phaseolus vulgaris
Phvul.009G160600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23728691-23729690 Phaseolus vulgaris
Phvul.009G160600 2.0kb upstream 2.0kb upstream 3168 true Chr09: 23729691-23732858 Phaseolus vulgaris
Phvul.009G160600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23730859-23732858 Phaseolus vulgaris
Phvul.009G160600 2.0kb downstream 2.0kb downstream 3168 true Chr09: 23727691-23730858 Phaseolus vulgaris
Phvul.009G160600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23727691-23729690 Phaseolus vulgaris
Phvul.009G160600 5.0kb upstream 5.0kb upstream 6168 true Chr09: 23729691-23735858 Phaseolus vulgaris
Phvul.009G160600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23730859-23735858 Phaseolus vulgaris
Phvul.009G160600 5.0kb downstream 5.0kb downstream 6168 true Chr09: 23724691-23730858 Phaseolus vulgaris
Phvul.009G160600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23724691-23729690 Phaseolus vulgaris
Phvul.009G160600 10.0kb upstream 10.0kb upstream 11168 true Chr09: 23729691-23740858 Phaseolus vulgaris
Phvul.009G160600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23730859-23740858 Phaseolus vulgaris
Phvul.009G160600 10.0kb downstream 10.0kb downstream 11168 true Chr09: 23719691-23730858 Phaseolus vulgaris
Phvul.009G160600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23719691-23729690 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309170 5265 Fabidae View MSA
124067897 5270 Rosid View MSA
123746981 5271 Pentapetalae View MSA
122786160 5272 Eudicot View MSA
122045376 5273 Angiosperm View MSA
121346766 5274 Embryophyte View MSA
123425626 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.08404 0.0 10.9036    
cufflinks 0.267746 0.0 4.98227 Low  
cufflinks 58.5868 0.0 176.683 High High
cufflinks 2.82625 0.0 16.7345    
cufflinks 0.379089 0.0 6.10155 Low  
cufflinks 51.7209 0.0 150.959 High High
cufflinks 0.0617964 0.0 2.18198 Low  
cufflinks 0.0456419 0.0 1.87028 Low Low
cufflinks 0.135774 0.0 3.12972 Low  
cufflinks 0.0909746 0.0 2.88526 Low  
cufflinks 0.466409 0.0 6.63397 Low  

0 Strain