Gene : Phvul.009G159400 P. vulgaris v2.1
Defline:  (1 of 8) PF07899 - Frigida-like protein (Frigida) Genomic Order:  1635
Name:  ? Phvul.009G159400 Secondary Identifier:  ? PAC:37151996
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G159400 0.5kb upstream 0.5kb upstream 5008 true Chr09: 23596809-23601816 Phaseolus vulgaris
Phvul.009G159400 0.5kb upstream 0.5kb upstream 500 false Chr09: 23596809-23597308 Phaseolus vulgaris
Phvul.009G159400 0.5kb downstream 0.5kb downstream 5008 true Chr09: 23597309-23602316 Phaseolus vulgaris
Phvul.009G159400 0.5kb downstream 0.5kb downstream 500 false Chr09: 23601817-23602316 Phaseolus vulgaris
Phvul.009G159400 1.0kb upstream 1.0kb upstream 5508 true Chr09: 23596309-23601816 Phaseolus vulgaris
Phvul.009G159400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23596309-23597308 Phaseolus vulgaris
Phvul.009G159400 1.0kb downstream 1.0kb downstream 5508 true Chr09: 23597309-23602816 Phaseolus vulgaris
Phvul.009G159400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23601817-23602816 Phaseolus vulgaris
Phvul.009G159400 2.0kb upstream 2.0kb upstream 6508 true Chr09: 23595309-23601816 Phaseolus vulgaris
Phvul.009G159400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23595309-23597308 Phaseolus vulgaris
Phvul.009G159400 2.0kb downstream 2.0kb downstream 6508 true Chr09: 23597309-23603816 Phaseolus vulgaris
Phvul.009G159400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23601817-23603816 Phaseolus vulgaris
Phvul.009G159400 5.0kb upstream 5.0kb upstream 9508 true Chr09: 23592309-23601816 Phaseolus vulgaris
Phvul.009G159400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23592309-23597308 Phaseolus vulgaris
Phvul.009G159400 5.0kb downstream 5.0kb downstream 9508 true Chr09: 23597309-23606816 Phaseolus vulgaris
Phvul.009G159400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23601817-23606816 Phaseolus vulgaris
Phvul.009G159400 10.0kb upstream 10.0kb upstream 14508 true Chr09: 23587309-23601816 Phaseolus vulgaris
Phvul.009G159400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23587309-23597308 Phaseolus vulgaris
Phvul.009G159400 10.0kb downstream 10.0kb downstream 14508 true Chr09: 23597309-23611816 Phaseolus vulgaris
Phvul.009G159400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23601817-23611816 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297571 5265 Fabidae View MSA
124068332 5270 Rosid View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.41437 0.0 17.291   Low
cufflinks 9.88087 0.0 25.9023    
cufflinks 10.8982 0.0 28.4708    
cufflinks 5.7425 0.0 15.7196   Low
cufflinks 9.67091 0.0 25.4455    
cufflinks 10.9844 0.0 28.666   High
cufflinks 8.12153 0.0 21.4756    
cufflinks 8.11812 0.0 21.4615    
cufflinks 8.8313 0.0 23.2846    
cufflinks 10.6059 0.0 27.7229    
cufflinks 9.95641 0.0 26.0973    

0 Strain