Gene : Phvul.009G159200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11972:SF64 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN A-RELATED Genomic Order:  1633
Name:  ? Phvul.009G159200 Secondary Identifier:  ? PAC:37149822
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G159200 0.5kb upstream 0.5kb upstream 5925 true Chr09: 23569531-23575455 Phaseolus vulgaris
Phvul.009G159200 0.5kb upstream 0.5kb upstream 500 false Chr09: 23574956-23575455 Phaseolus vulgaris
Phvul.009G159200 0.5kb downstream 0.5kb downstream 5925 true Chr09: 23569031-23574955 Phaseolus vulgaris
Phvul.009G159200 0.5kb downstream 0.5kb downstream 500 false Chr09: 23569031-23569530 Phaseolus vulgaris
Phvul.009G159200 1.0kb upstream 1.0kb upstream 6425 true Chr09: 23569531-23575955 Phaseolus vulgaris
Phvul.009G159200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23574956-23575955 Phaseolus vulgaris
Phvul.009G159200 1.0kb downstream 1.0kb downstream 6425 true Chr09: 23568531-23574955 Phaseolus vulgaris
Phvul.009G159200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23568531-23569530 Phaseolus vulgaris
Phvul.009G159200 2.0kb upstream 2.0kb upstream 7425 true Chr09: 23569531-23576955 Phaseolus vulgaris
Phvul.009G159200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23574956-23576955 Phaseolus vulgaris
Phvul.009G159200 2.0kb downstream 2.0kb downstream 7425 true Chr09: 23567531-23574955 Phaseolus vulgaris
Phvul.009G159200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23567531-23569530 Phaseolus vulgaris
Phvul.009G159200 5.0kb upstream 5.0kb upstream 10425 true Chr09: 23569531-23579955 Phaseolus vulgaris
Phvul.009G159200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23574956-23579955 Phaseolus vulgaris
Phvul.009G159200 5.0kb downstream 5.0kb downstream 10425 true Chr09: 23564531-23574955 Phaseolus vulgaris
Phvul.009G159200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23564531-23569530 Phaseolus vulgaris
Phvul.009G159200 10.0kb upstream 10.0kb upstream 15425 true Chr09: 23569531-23584955 Phaseolus vulgaris
Phvul.009G159200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23574956-23584955 Phaseolus vulgaris
Phvul.009G159200 10.0kb downstream 10.0kb downstream 15425 true Chr09: 23559531-23574955 Phaseolus vulgaris
Phvul.009G159200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23559531-23569530 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314275 5265 Fabidae View MSA
124063866 5270 Rosid View MSA
123751204 5271 Pentapetalae View MSA
122794480 5272 Eudicot View MSA
122044435 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.0765 0.0 58.2707    
cufflinks 25.2023 0.0 67.2503    
cufflinks 48.3029 0.0 137.642 High High
cufflinks 20.9445 0.0 54.9021   Low
cufflinks 28.4157 0.0 76.146    
cufflinks 31.0468 0.0 84.4551    
cufflinks 33.6908 0.0 92.5168 High  
cufflinks 25.6261 0.0 68.6627    
cufflinks 42.0357 0.0 118.012 High  
cufflinks 68.3956 0.0 202.628 High High
cufflinks 25.4782 0.0 67.8402    

0 Strain