Gene : Phvul.009G160000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21660:SF6 - F19P19.27 PROTEIN Genomic Order:  1641
Name:  ? Phvul.009G160000 Secondary Identifier:  ? PAC:37150404
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1121 Phaseolus vulgaris pathologic  
Pvulgaris PWY-321 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5148 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6733 Phaseolus vulgaris pathologic  
Pvulgaris PWY-735 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G160000 0.5kb upstream 0.5kb upstream 2145 true Chr09: 23664183-23666327 Phaseolus vulgaris
Phvul.009G160000 0.5kb upstream 0.5kb upstream 500 false Chr09: 23664183-23664682 Phaseolus vulgaris
Phvul.009G160000 0.5kb downstream 0.5kb downstream 2145 true Chr09: 23664683-23666827 Phaseolus vulgaris
Phvul.009G160000 0.5kb downstream 0.5kb downstream 500 false Chr09: 23666328-23666827 Phaseolus vulgaris
Phvul.009G160000 1.0kb upstream 1.0kb upstream 2645 true Chr09: 23663683-23666327 Phaseolus vulgaris
Phvul.009G160000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 23663683-23664682 Phaseolus vulgaris
Phvul.009G160000 1.0kb downstream 1.0kb downstream 2645 true Chr09: 23664683-23667327 Phaseolus vulgaris
Phvul.009G160000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 23666328-23667327 Phaseolus vulgaris
Phvul.009G160000 2.0kb upstream 2.0kb upstream 3645 true Chr09: 23662683-23666327 Phaseolus vulgaris
Phvul.009G160000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 23662683-23664682 Phaseolus vulgaris
Phvul.009G160000 2.0kb downstream 2.0kb downstream 3645 true Chr09: 23664683-23668327 Phaseolus vulgaris
Phvul.009G160000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 23666328-23668327 Phaseolus vulgaris
Phvul.009G160000 5.0kb upstream 5.0kb upstream 6645 true Chr09: 23659683-23666327 Phaseolus vulgaris
Phvul.009G160000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 23659683-23664682 Phaseolus vulgaris
Phvul.009G160000 5.0kb downstream 5.0kb downstream 6645 true Chr09: 23664683-23671327 Phaseolus vulgaris
Phvul.009G160000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 23666328-23671327 Phaseolus vulgaris
Phvul.009G160000 10.0kb upstream 10.0kb upstream 11645 true Chr09: 23654683-23666327 Phaseolus vulgaris
Phvul.009G160000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 23654683-23664682 Phaseolus vulgaris
Phvul.009G160000 10.0kb downstream 10.0kb downstream 11645 true Chr09: 23664683-23676327 Phaseolus vulgaris
Phvul.009G160000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 23666328-23676327 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307118 5265 Fabidae View MSA
124063783 5270 Rosid View MSA
123750481 5271 Pentapetalae View MSA
122787184 5272 Eudicot View MSA
122043705 5273 Angiosperm View MSA
121345326 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.0991 0.0 134.671 High  
cufflinks 46.0943 0.0 119.247 High  
cufflinks 35.739 0.0 93.019   Low
cufflinks 61.0986 0.0 157.985 High High
cufflinks 55.845 0.0 144.351 High  
cufflinks 28.2584 0.0 74.3926   Low
cufflinks 38.1468 0.0 98.9739 High  
cufflinks 40.0047 0.0 103.646 High  
cufflinks 46.3 0.0 119.769 High  
cufflinks 49.3556 0.0 127.608 High  
cufflinks 65.4251 0.0 169.432 High High

0 Strain